Return to main results Retrieve Phyre Job Id

Job DescriptionQ46877
Confidence32.97%DateThu Jan 5 12:35:29 GMT 2012
Rank324Aligned Residues95
% Identity14%Templatec3u1hA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-isopropylmalate dehydrogenase; PDBTitle: crystal structure of ipmdh from the last common ancestor of bacillus
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   229230.........240.........250.........260.........270.........280.........290.........300........
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  VVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGIAETDPRVAVKIFNVARSDKNEILTNVFRSKGV
Query Conservation 

 
     

  
  
       

 


 
 



  

  

 

   
  
 
            
   
   
 
Alig confidence 




















.












































.









..
Template Conservation    

    

 
 

  
   . 
 

 
 
 

   



     


 


 
      


   . 

  
  

..
Template Sequence  LYTREEIERIIRKAFELALTR. KKKVTSVDKANVLESSRLWREVAEEVAKEYPDVELEHMLVDNAAM. QLIRNPRQFD. .
Template Known Secondary structure  B

TT.TS
TTT
TT
TTS.
GGG
S..
Template Predicted Secondary structure 


.






.





..
Template SS confidence 















































































   161........170.........180. ........190.........200.........210.........220...... ...230......
 
   309310.........320.......
Predicted Secondary structure 







Query SS confidence 


















Query Sequence  LVGTSTMNNVMMPKIAGLV
Query Conservation 
 




       
   
Alig confidence 


















Template Conservation 


  

 








 
Template Sequence  VIVTENMFGDILSDEASMI
Template Known Secondary structure 
Template Predicted Secondary structure 


Template SS confidence 


















   237..240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions