Job Description Q46877 Confidence 69.14% Date Thu Jan 5 12:35:29 GMT 2012 Rank 240 Aligned Residues 148 % Identity 10% Template c3sg0A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: the crystal structure of an extracellular ligand-binding receptor from2 rhodopseudomonas palustris haa2 Resolution 1.20 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.													230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.				.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.				.	.
Query Sequence		I	L	T	P	F	S	R	L	V	T	P	K	I	T	E	I	L	G	F	N	L	P	V	D	M	I	A	T	S	H	G	V	.	.	.	.	.	.	.	.	.	.	.	.	V	W	R	.	.	D	N	P	T	Q	I	V	E	L	Y	L	K	W	A	A	D	Y	Q	E	D	R	I	T	I	F	Y	D	T	M	S	N
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.				.	.
Alig confidence																				.														.	.	.	.	.	.	.	.	.	.	.	.				.	.																												.
Template Conservation																				.																																																										.
Template Sequence		L	I	G	S	S	L	T	P	V	S	L	P	L	I	D	I	A	A	.	E	A	K	T	P	L	X	T	X	A	A	A	A	I	L	V	A	P	X	D	E	R	R	K	W	V	Y	K	V	V	P	N	D	D	I	X	A	E	A	I	G	K	Y	I	A	K	T	G	A	K	K	V	G	Y	I	G	F	.	S	D	A
Template Known Secondary structure						S	S													.		T	T										G	G	G	T		S			T	T	G	G	G					S																	T	T										.	S	S
Template Predicted Secondary structure																				.																																																										.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																							.																				.	.
Query SS confidence																							.																				.	.
Query Sequence		N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	.	V	K	I	F	N	V	A	R	S	D	K	N	E	I	L	T	N	V	F	.	.	R	S	K	G	V	L	V	G	T	S	T	M	N	N	V	M	M	P	K	I	A	G	L	V	E	E	M	T	G	L	R	F	R	N	K	R	A
Query Conservation																							.																				.	.
Alig confidence																							.																				.	.											.	.	.	.	.	.																				.	.
Template Conservation																																																							.	.	.	.	.	.																				.	.
Template Sequence		Y	G	E	G	Y	Y	K	V	L	A	A	A	A	P	K	L	G	F	E	L	T	T	H	E	V	Y	A	R	S	D	A	S	V	T	G	Q	V	L	K	I	I	A	T	K	P	D	A	V	F	I	A	S	A	.	.	.	.	.	.	G	T	P	A	V	L	P	Q	K	A	L	R	E	R	G	F	K	G	A	.	.
Template Known Secondary structure																		T											T	T		S												T			S								.	.	.	.	.	.	S	G	G	G										T	T			S		.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.																				.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	F	G	S	H	G	W	S	G	G	A	V	D	R	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	I	Y	Q	T	H	G	V	A	T	E	E	F	I	K	L
Template Known Secondary structure		.					G	G	G		S
Template Predicted Secondary structure		.
Template SS confidence
			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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