Job Description Q46877 Confidence 99.94% Date Thu Jan 5 12:35:29 GMT 2012 Rank 34 Aligned Residues 208 % Identity 16% Template c3sd9B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of serratia fonticola sfh-i: source of the2 nucleophile in the catalytic mechanism of mono-zinc metallo-beta-3 lactamases Resolution 1.83 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.										.
Query SS confidence																																											.										.
Query Sequence		S	I	V	V	K	N	N	I	H	W	V	G	Q	R	D	W	E	V	R	D	F	H	G	T	E	Y	K	T	L	R	G	S	S	Y	N	S	Y	L	I	R	E	.	E	K	N	V	L	I	D	T	V	.	D	H	K	F	S	R	E	F	V	Q	N	L	R	N	E	I	D	L	A	D	I	D	Y	I	V	I	N	H
Query Conservation																																											.										.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.										.															.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Sequence		L	T	H	F	K	G	P	L	Y	I	V	E	D	K	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	E	N	S	M	V	Y	I	G	T	D	G	I	T	I	I	G	A	T	W	T	P	E	T	A	E	T	L	Y	K	E	I	R	K	.	V	S	P	L	P	I	N	E	V	I	N	T	N
Template Known Secondary structure							T	T								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										S	S						S			S	S														.												S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.															.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	E	D	H	A	G	A	L	T	E	L	M	A	Q	I	P	D	T	P	I	Y	C	T	A	N	A	I	D	S	I	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	H	H	H	P	E	W	N	F	N	V	V	K	T	G	D	T	L	D	I	G	N	G	K	Q	L	I	F	V	E	T	P	M
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																	.	.																																																				.
Template Sequence		Y	H	T	D	R	A	G	G	N	A	Y	W	K	T	L	.	.	G	A	K	I	V	A	T	Q	M	T	Y	D	L	Q	K	S	Q	W	G	S	I	V	N	F	T	R	Q	G	N	N	K	Y	P	N	L	E	K	S	L	P	D	T	V	F	P	G	D	F	N	L	Q	.	N	G	S	I	R	A	M	Y	L	G	E
Template Known Secondary structure		S	S					T	T							T	.	.	T																													T	T										S				S	S					T	.	T	T	T
Template Predicted Secondary structure																	.	.																																																				.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		L	H	W	P	D	S	M	M	T	Y	L	T	G	D	A	V	L	F	S	N	D	A	F	G	Q	H	Y	C	D	E	H	L	F	N	D	E	V	D	Q	T	E	L	F	E	Q	C	Q	R	Y	Y	A	N	I	L	T	P	F	S	R	L	V	T	P	K	I	T	E	I	L	G	F	.	N	L	P	V	D	M	I	A
Query Conservation																																																																									.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	H	T	K	D	G	I	F	V	Y	F	P	A	E	R	V	L	Y	G	N	C	I	L	K	E	N	L	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	F	A	N	R	T	E	Y	P	K	T	L	E	K	L	K	G	L	I	E	Q	G	E	L	K	V	D	S	I	I
Template Known Secondary structure		S	S	S	S	S							T	T	T	T					T	T	T	S		S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T			T	T															T	T	S	S			S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.																					.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	H	G	V	V	W	R	D	N	P	T	Q	I	V	E	L	Y	L	K	W	A	A	D	Y	Q
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		A	G	H	D	T	P	I	H	D	.	.	V	G	L	I	D	H	Y	L	T	L	L	E	K	A	P
Template Known Secondary structure			S	S	S	S	S				.	.	T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions