Job Description Q46877 Confidence 35.59% Date Thu Jan 5 12:35:29 GMT 2012 Rank 313 Aligned Residues 134 % Identity 20% Template c3p2oB_ PDB info PDB header:oxidoreductase, hydrolase Chain: B: PDB Molecule:bifunctional protein fold; PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni Resolution 2.23 Å

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		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																																																			.													.	.
Query SS confidence																																																																			.													.	.
Query Sequence		V	V	W	R	D	N	P	T	Q	I	V	E	L	Y	L	K	W	A	A	D	Y	Q	E	D	R	I	T	I	F	Y	D	T	M	S	N	N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	V	K	I	F	N	V	A	R	S	.	D	K	N	E	I	L	T	N	V	F	R	S	.	.
Query Conservation																																																																			.													.	.
Alig confidence																																																						.	.												.													.	.
Template Conservation																																																						.	.
Template Sequence		A	L	S	A	K	I	K	E	E	L	K	E	K	N	Q	F	L	K	S	K	G	I	E	S	C	L	A	V	I	L	V	G	D	N	P	A	S	Q	T	Y	V	K	S	K	A	K	A	C	E	E	C	G	.	.	I	K	S	L	V	Y	H	L	N	E	N	I	T	Q	N	E	L	L	A	L	I	N	T	L	N	H
Template Known Secondary structure																					T	T											S																			T	T	.	.										T	T
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
						306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.																																					.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	K	G	V	L	V	G	T	S	T	M	N	N	V	M	M	P	K	I	A	G	L	V	E	E	M	T	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	R	N	K	R	A	S	A	F	G	S
Query Conservation		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	S	V	H	G	I	L	V	Q	L	P	L	P	D	H	I	C	K	D	L	I	L	E	S	I	I	S	S	K	D	V	D	G	F	H	P	I	N	V	G	Y	L	N	L	G	L	E	S	G	F	L	P	C	T	P	L	G	V	X	K	L	L	K	A	Y	E	I	D	L	E	G	K	D	A	V	I	I	G	A
Template Known Secondary structure			T	T								S				T	T	S									S		G	G	G		T	T			S									T	T			S	S																T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	W	S	G	G	A	V	D	R	L	S	T	R	L	Q	D	A	G	F	E	M
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	S	N	I	V	G	R	P	X	A	T	X	L	L	N	A	G	A	T	V
Template Known Secondary structure		.	.	.		T	T	T											T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions