Job Description Q46877 Confidence 58.21% Date Thu Jan 5 12:35:29 GMT 2012 Rank 264 Aligned Residues 76 % Identity 7% Template c3mv2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of a-cop in complex with e-cop Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.		.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		R	P	D	Q	D	A	L	K	L	C	R	E	H	G	R	E	I	A	R	.	Q	W	A	L	A	P	L	P	Q	S	T	V	N	T	V	V	K	E	E	T	S	A	T	T	T	A	D	L	G	P	R	M	Q	C	S	V	C	Q	W	I	Y	D	P	A	K	G	E	P	M	Q	D	V	A	P	G	T	P	W	S	E
Query Conservation																					.
Alig confidence																					.																																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	S	G	P	R	A	E	Q	A	R	K	I	K	N	K	A	D	S	M	A	S	D	A	I	P	I	D	F	D	P	Y	A	K	F	D	I	C	A	A	T	Y	K	P	I	Y	E	D	T	P	S	V	S	D	P	L	T	G	S	K	Y	V	I	T	E	K	D	K	I	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S															T	S				S	S			S			T	T	S						T	T	T						S	S	S						T	T	T						G	G	G	T	T	S	B	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1113	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	D	N	F	L	C	P	E	C	S	L	G	K
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	D	R	I	A	M	I	S	K
Template Known Secondary structure		.	.	.	.	.	.		S	S	S	S		B	B
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								1182	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions