Job Description Q46877 Confidence 67.71% Date Thu Jan 5 12:35:29 GMT 2012 Rank 242 Aligned Residues 75 % Identity 13% Template c3mkrB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/epsilon-cop subcomplex of the copi2 vesicular coat Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		P	D	Q	D	A	L	K	L	C	R	E	H	G	R	E	I	.	A	R	Q	W	A	L	A	P	L	P	Q	S	T	V	N	T	V	V	K	E	E	T	S	A	T	T	T	A	D	L	G	P	R	M	Q	C	S	V	C	Q	W	I	Y	D	P	A	K	G	E	P	M	Q	D	V	A	P	G	T	P	W	S	E	V
Query Conservation																		.
Alig confidence																		.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	P	E	V	A	Q	Q	T	R	K	I	L	S	A	C	E	K	N	P	T	D	A	Y	Q	L	N	Y	D	M	H	N	P	F	D	I	C	A	A	S	Y	R	P	I	Y	R	G	K	P	V	E	K	C	P	L	S	G	A	C	Y	S	P	E	F	K	G	Q	I	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																				S			B	S	S			S			T	T	S				B	B	T	T	T			B			T	T	S						T	T	T						G	G	G	T	T	S	B	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1133	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200
		456	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	N	F	L	C	P	E	C	S	L	G	K
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	C	K	V	T	T	V	T	E
Template Known Secondary structure		.	.	.	.	.		T	T	T	S	S	B	B
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							1201	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions