Job Description Q46877 Confidence 99.96% Date Thu Jan 5 12:35:29 GMT 2012 Rank 24 Aligned Residues 195 % Identity 22% Template c3lvzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:blr6230 protein; PDBTitle: new refinement of the crystal structure of bjp-1, a subclass b32 metallo-beta-lactamase of bradyrhizobium japonicum Resolution 1.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.																									.
Query SS confidence																																											.																									.
Query Sequence		S	I	V	V	K	N	N	I	H	W	V	G	Q	R	D	W	E	V	R	D	F	H	G	T	E	Y	K	T	L	R	G	S	S	Y	N	S	Y	L	I	R	E	.	E	K	N	V	L	I	D	T	V	D	H	K	F	S	R	E	F	V	Q	N	L	R	N	E	.	I	D	L	A	D	I	D	Y	I	V	I	N	H
Query Conservation																																											.																									.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																									.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	F	Q	L	I	D	N	I	Y	Y	V	G	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	A	V	Y	V	I	K	T	S	Q	G	L	I	L	M	D	T	A	M	P	Q	S	T	G	M	I	K	D	N	I	A	K	L	G	F	K	V	A	D	I	K	L	I	L	N	T	H
Template Known Secondary structure							T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S								T	T										G	G	G											T	T			G	G	G							S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.																			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.												.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	E	D	H	A	G	A	L	T	E	L	M	A	Q	I	P	D	T	P	I	Y	C	T	A	N	A	I	D	S	I	N	G	.	.	.	.	.	.	.	.	.	.	.	H	H	H	H	P	E	W	N	F	N	V	V	K	T	G	D	T	L	D	I	G	N	G	K	Q	L	I	F	V	E	T	P	M	L	H	W
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																	.	.	.	.	.	.	.	.	.	.	.																						.												.
Template Conservation																		.																																																	.												.
Template Sequence		A	H	L	D	H	T	G	G	F	A	E	I	K	K	E	T	.	G	A	Q	L	V	A	G	E	R	D	K	P	L	L	E	G	G	Y	Y	P	G	D	E	K	N	E	D	L	A	F	P	A	V	K	V	D	R	A	V	K	E	G	D	R	V	T	L	G	.	D	T	T	L	T	A	H	A	T	P	G	.	H	S
Template Known Secondary structure			S					T	T									.								G	G	G							T			T	T		T	T		G	G	G								S					T	T						T	.	T										S	.	S	S
Template Predicted Secondary structure																		.																																																	.												.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.		.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	S	M	M	T	Y	L	T	G	D	A	V	L	F	S	N	D	A	F	G	Q	H	Y	C	D	E	H	L	F	N	D	E	V	D	Q	T	E	L	F	E	Q	C	Q	R	Y	Y	A	N	I	L	T	P	F	S	R	L	V	T	P	K	I	T	E	I	L	G	F	N	L	P	V	D	M	I	A	T	S	H	G
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		P	G	C	T	S	W	E	M	T	V	K	D	G	K	E	D	R	E	V	L	F	F	C	S	G	T	V	A	L	N	R	L	V	G	Q	P	T	Y	A	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	D	Y	R	A	T	F	A	K	A	K	A	.	.	M	K	I	D	V	L	L	G	P	H	P
Template Known Secondary structure		T	T											T	T														T	T				S	S	S		S	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	S			S					S	S	G
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.														220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.
		229	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	W	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	Y	G
Template Known Secondary structure		G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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