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Job DescriptionQ46877
Confidence29.16%DateThu Jan 5 12:35:29 GMT 2012
Rank345Aligned Residues109
% Identity7%Templatec3lvuB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:abc transporter, periplasmic substrate-binding protein; PDBTitle: crystal structure of abc transporter, periplasmic substrate-binding2 protein spo2066 from silicibacter pomeroyi
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   245....250.........260.........270.........280.........290.........300.........310.........320....
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Query Sequence  WAADYQEDRITIFYDTMSNNTRMMADAIAQGIAETDPRVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIA
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Template Sequence  LGPDGAPLALRFLLRQGDSDXQTVLEIYTRALERLG. . IAAQIEKVDNAQYTARVAE. LDFDLTPFRRD. LSLSPGNEQR
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TTSSB


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   431........440.........450.........460...... ...470.........480..... ....490...... ...500......
 
   325....330.........340.........350.........360..
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Query Sequence  GLVEEMTGLRFRNKRASAFGSHGWSGGAVDRLSTRLQD
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Template Sequence  LYWGSHSAGQPGT. . . . . RNLXGAASPAIDAXIDRXLA
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GGGTT
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   507..510......... 520.........530.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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