Job Description Q46877 Confidence 34.49% Date Thu Jan 5 12:35:29 GMT 2012 Rank 318 Aligned Residues 147 % Identity 10% Template c3hutA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative branched-chain amino acid abc PDBTitle: crystal structure of a putative branched-chain amino acid2 abc transporter from rhodospirillum rubrum Resolution 1.93 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.												.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	T	P	F	S	R	L	V	T	P	K	I	T	E	I	L	G	F	N	L	P	V	D	M	I	A	T	S	H	G	.	.	.	.	.	.	.	.	.	.	.	V	V	W	R	D	N	P	T	Q	I	V	E	L	Y	L	K	W	A	A	D	Y	Q	E	D	R	I	T	I	F	Y	D	T	M	S	N	N	T	R
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.													.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation																				.																																																						.
Template Sequence		V	L	G	D	F	S	S	T	V	S	X	A	A	G	S	I	Y	G	.	K	E	G	X	P	Q	L	S	P	T	A	A	H	P	D	Y	I	K	I	S	P	W	Q	F	R	A	I	T	T	P	A	F	E	G	P	N	N	A	A	W	X	I	G	D	G	F	T	S	V	A	V	I	G	.	V	T	T	D	W	G	L
Template Known Secondary structure						S	S													.			T						S	S				G	G	G	T	T	S		T	T				S	S			G	G	G												T	T									.		S	S
Template Predicted Secondary structure																				.																																																						.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																		.																					.	.
Query SS confidence																		.																					.	.
Query Sequence		M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	.	V	A	V	K	I	F	N	V	A	R	S	D	K	N	E	I	L	T	N	V	.	.	F	R	S	K	G	V	L	V	G	T	S	T	M	N	N	V	M	M	P	K	I	A	G	L	V	E	E	M	T	G	L	R	F	R	N	K	R	A	S	A	F
Query Conservation																		.																					.	.
Alig confidence																		.																					.	.													.	.	.	.	.	.																			.	.	.
Template Conservation																																																					.	.	.	.	.	.																			.	.	.
Template Sequence		S	S	A	Q	A	F	R	K	A	F	E	L	R	G	G	A	V	V	V	N	E	E	V	P	P	G	N	R	R	F	D	D	V	I	D	E	I	E	D	E	A	P	Q	A	I	Y	L	A	X	A	Y	.	.	.	.	.	.	E	D	A	A	P	F	L	R	A	L	R	A	R	G	S	A	L	P	.	.	.	V	Y
Template Known Secondary structure														T	T											T	T																	S						S			.	.	.	.	.	.													T	T					.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.																			.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240							.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260
		344	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	H	G	W	S	G	G	A	V	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	S	A	L	Y	S	P	K	F	I	D
Template Known Secondary structure				G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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