Job Description Q46877 Confidence 99.22% Date Thu Jan 5 12:35:29 GMT 2012 Rank 113 Aligned Residues 180 % Identity 15% Template c3g1pA_ PDB info PDB header:lyase Chain: A: PDB Molecule:protein phnp; PDBTitle: crystals structure of phnp from e.coli k-12 Resolution 1.40 Å

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		34	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure											.																																																						.
Query SS confidence											.																																																						.
Query Sequence		S	Y	N	S	Y	L	I	R	E	.	E	K	N	V	L	I	D	T	V	D	H	K	F	S	R	E	F	V	Q	N	L	R	N	E	I	D	L	A	D	I	D	Y	I	V	I	N	H	A	E	E	D	H	A	G	A	L	T	E	L	M	A	Q	I	.	P	D	T	P	I	Y	C	T	A	N	A	I	D	S	I	N
Query Conservation											.																																																						.
Alig confidence											.													.	.	.	.	.	.	.	.																																		.
Template Conservation																								.	.	.	.	.	.	.	.
Template Sequence		Q	P	C	S	G	V	V	K	F	N	D	A	I	T	L	I	D	A	G	L	H	D	.	.	.	.	.	.	.	.	L	A	D	R	W	S	P	G	S	F	Q	Q	F	L	L	T	H	Y	H	M	D	H	V	Q	G	L	F	P	L	R	W	G	V	G	D	P	I	P	V	Y	G	P	P	D	E	Q	G	C	D	D
Template Known Secondary structure			B	S							T	T										T	T	.	.	.	.	.	.	.	.							T	T	S	S						S								G	G	G	T	T	T	T	T		S	S	S										S	S		S	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.									60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure															.																																					.	.
Query SS confidence															.																																					.	.
Query Sequence		G	H	H	H	H	P	E	W	N	F	N	V	V	.	K	T	G	D	T	L	D	I	G	N	G	K	Q	L	I	F	V	E	T	P	M	L	H	W	P	D	S	M	M	T	Y	L	T	G	D	A	.	.	V	L	F	S	N	D	A	F	G	Q	H	Y	C	D	E	H	L	F	N	D	E	V	D	Q	T	E	L	F
Query Conservation															.																																					.	.
Alig confidence															.											.	.	.																								.	.								.
Template Conservation																										.	.	.																																	.
Template Sequence		L	F	K	H	P	G	L	L	D	F	S	H	T	V	E	P	F	V	V	F	D	L	Q	G	.	.	.	L	Q	V	T	P	L	P	L	N	H	S	K	L	T	F	G	Y	L	L	E	T	A	H	S	R	V	A	W	L	S	D	T	.	A	G	L	P	E	K	T	L	K	F	L	R	N	N	Q	P	Q	V	M	V
Template Known Secondary structure		T	T	T	S		T	T									T	T						T	T	.	.	.										S	S	S										S	S								S		.	S	S												T			S
Template Predicted Secondary structure																										.	.	.																																	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	C	Q	R	Y	Y	A	N	I	L	T	P	F	S	R	L	V	T	P	K	I	T	E	I	L	G	F	N	L	P	V	D	M	I	A	T	S	H
Query Conservation
Alig confidence																													.	.
Template Conservation																													.	.
Template Sequence		M	D	C	S	H	P	P	R	A	D	A	P	R	N	H	C	D	L	N	T	V	L	A	L	N	Q	V	.	.	I	R	S	P	R	V	I	L	T	H
Template Known Secondary structure						B	S	S		S	S			S	S	S		B											.	.				S						S
Template Predicted Secondary structure																													.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions