Job Description Q46877 Confidence 99.32% Date Thu Jan 5 12:35:29 GMT 2012 Rank 102 Aligned Residues 143 % Identity 11% Template c3fvwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nad(p)h-dependent fmn reductase; PDBTitle: crystal structure of the q8dwd8_strmu protein from2 streptococcus mutans. northeast structural genomics3 consortium target smr99. Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		252	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.														.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure												.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	I	T	I	F	Y	D	T	M	.	.	S	N	N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	V	K	I	F	N	V	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	K	N	E	I	L	T	N	V	F	R	S	K	G	V	L	V	G	T	S	T	M	N
Query Conservation												.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																			.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.
Template Sequence		K	R	I	L	F	I	V	G	S	F	S	E	G	S	F	N	R	Q	L	A	K	K	A	E	T	I	I	G	D	R	.	.	.	A	Q	V	S	Y	L	S	Y	D	R	V	P	F	F	N	Q	D	L	E	T	S	V	H	P	E	V	A	H	A	R	E	E	V	Q	E	A	D	A	I	W	I	F	S	P	V	Y	N
Template Known Secondary structure									S			S	T	T															T	T	S	.	.	.	S								S	S						G	G	G	T	T	S																S									B	T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330											.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	M	M	P	K	I	A	G	L	V	E	E	M	.	.	.	.	.	.	.	.	.	.	T	G	L	R	F	R	N	K	R	A	S	A	F	G	S	H	G	W	S	G	G	A	V	D	R	L	S	T	R	L	Q	D	A	G	F	E	M	S	L	S	L	K	A	K	W	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.																		.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		Y	A	I	P	G	P	V	K	N	L	L	D	W	L	S	R	S	L	D	L	S	D	P	T	G	P	S	V	L	Q	D	K	I	V	T	V	S	S	V	A	N	.	G	A	E	V	F	E	D	Y	R	S	L	L	P	F	I	R	X	H	L	V	D	Q	L	T	G	V	P	I	N	S	E	A	W	S	T	G	I	L
Template Known Secondary structure		T	B													T	S		S		S	S		T	T	S			T	T	T	T									S		.					S										T	T														T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	D	Q	D	A	L	K	L	C	R	E	H	G	R	E	I	A	R	Q	W	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	S	A	E	K	L	A	E	L	S	A	Q	A	D	A	L	L	S	A	I	E	N
Template Known Secondary structure																						T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions