Job Description Q46877 Confidence 99.28% Date Thu Jan 5 12:35:29 GMT 2012 Rank 106 Aligned Residues 147 % Identity 10% Template c3f2vA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:general stress protein 14; PDBTitle: crystal structure of the general stress protein 142 (tde0354) in complex with fmn from treponema denticola,3 northeast structural genomics consortium target tdr58. Resolution 2.00 Å

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		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		D	R	I	T	I	F	Y	D	T	M	S	N	N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	V	K	I	F	N	V	A	R	S	D	.	.	.	.	K	N	E	I	L	T	N	V	F	R	S	K	G	V	L	V	G	T	S	T	M	N	N	V	M	M	P	K	I	A	G	L	V
Query Conservation																																													.	.	.	.
Alig confidence																																													.	.	.	.
Template Conservation
Template Sequence		P	K	T	L	I	I	L	A	H	P	N	I	S	Q	S	T	V	H	K	H	W	S	D	A	V	R	Q	H	T	D	R	F	T	V	H	E	L	Y	A	V	Y	P	Q	G	K	I	D	V	A	A	E	Q	K	L	I	E	T	H	D	S	L	V	W	Q	F	P	I	Y	W	F	N	C	P	P	L	L	K	Q	W	L
Template Known Secondary structure											T	T	G	G	G		S										T	T		T	T	T											T	T														T	S	S	S								B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		328	.	330										.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.															.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	M	.	.	.	.	.	.	.	.	.	T	G	L	R	F	R	N	K	R	A	S	A	F	G	S	H	G	W	S	G	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	R	L	S	T	R	L	Q	D	A	G	F	E	M	S	L	S	L	K	A	K	W	R	P	D	Q	D	A	L	K	L
Query Conservation					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																																																																										.	.
Template Sequence		D	E	V	L	T	Y	G	W	A	Y	G	S	K	G	K	A	L	K	G	R	K	I	A	L	A	V	S	L	G	A	P	A	A	D	Y	R	A	D	G	A	V	G	C	S	V	A	E	V	L	R	P	F	E	L	T	A	K	Y	C	N	A	D	Y	R	P	P	F	T	F	H	T	S	.	.	E	A	A	R	Q	E
Template Known Secondary structure					S		B	T	T	T	B	S	S	S			S	S	T	T										S	S		G	G	G	S	S	T	T	S	S	S		S																T	T													.	.
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	E	H	G	R	E	I	A	R	Q	W	A	L	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	R	S	A	R	D	Y	L	A	W	L	D	A	L	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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