Job Description Q46877 Confidence 23.70% Date Thu Jan 5 12:35:29 GMT 2012 Rank 391 Aligned Residues 205 % Identity 10% Template c3e49A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein duf849 with a tim barrel fold; PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 with a tim barrel fold (bxe_c0966) from burkholderia xenovorans lb4003 at 1.75 a resolution Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	R	L	V	T	P	K	I	T	E	I	L	G	F	N	L	P	V	D	M	I	A	T	S	H	G	V	V	W	R	D	N	P	T	Q	I	V	E	L	Y	L	K	W	A	A	D	Y	Q	E	D	R	I	T	I	F	Y	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.					.																									.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.					.																									.	.	.	.
Template Sequence		D	P	A	A	F	A	E	F	L	P	R	I	K	S	.	N	T	D	A	.	V	I	N	L	T	T	G	G	S	P	H	X	T	V	E	E	R	L	R	P	A	T	H	Y	.	.	.	.	X	P	E	L	A	S	L	N	X	G	S	X	N	F	G	L	Y	P	X	L	E	R	F	K	E	F	A	H	G	W	E	R
Template Known Secondary structure							T	T								.					.						S		S		T	T	S													.	.	.	.			S							S							G	G	G	G	G	T					S	S
Template Predicted Secondary structure																.					.																									.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
											261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.						.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	M	S	N	N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	V	K	I	F	N	V	A	R	S	D	K	N	E	I	L	T	N	V	F	R	S	K	G	.	.	.	.	.	V	L	V	G	T	S	T	M	N	N	V	M	M	P	K	I	A	G	L
Query Conservation		.	.	.	.	.	.	.	.	.																																																.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																.	.	.	.	.
Template Conservation
Template Sequence		E	H	L	E	R	S	R	D	L	V	F	K	N	T	F	A	D	I	E	F	I	L	K	T	C	G	G	N	G	T	R	F	E	F	E	C	Y	D	T	S	H	L	Y	N	L	A	H	F	V	D	R	K	L	A	T	P	P	F	F	V	Q	T	V	F	G	L	L	G	G	I	G	P	H	P	E	D	L	A	H	X
Template Known Secondary structure						G	G	G	G																			T	T	T									S													T	T		S		S	S								S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.									.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.
Query Sequence		V	E	E	M	T	G	L	R	F	R	N	K	R	A	S	A	F	G	S	H	G	W	S	G	G	A	V	D	R	L	S	T	R	L	Q	D	A	G	F	E	M	S	L	S	L	K	.	.	.	.	.	.	.	.	A	K	W	R	P	D	Q	D	A	L	K	L	C	R	E	H	G	R	E	I	A	R	Q	W	A	L
Query Conservation																																																.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		R	R	T	A	D	R	L	F	G	A	D	Y	V	W	S	I	L	G	A	.	.	.	.	G	R	H	Q	I	P	L	A	S	I	G	A	A	Q	G	A	N	V	R	V	G	L	E	D	S	L	W	I	A	P	G	E	L	A	E	T	N	A	A	Q	V	R	K	I	R	Q	V	I	E	G	L	S	L	E	V	A	S
Template Known Secondary structure										G	G	G									.	.	.	.	G	G	G										T	T	T							T	T	T		S				T	T				S																T	T			B
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	L	P	Q	S	T	V	N	T	V	V	K	E	E	T	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	E	A	R	T	X	L	G	L	K	G	P	Q	N	V	N	F
Template Known Secondary structure										T				T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions