Job Description Q46877 Confidence 38.77% Date Thu Jan 5 12:35:29 GMT 2012 Rank 308 Aligned Residues 105 % Identity 12% Template c3dzbA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 thermophilus Resolution 2.46 Å

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		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.														300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	I	T	I	F	Y	D	T	M	S	N	N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	V	K	I	F	N	V	A	R	S	D	K	N	E	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	V	F	R	S	K	G	V	L	V	G	T	S	T	M	N	N	V
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.					.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation								.	.	.					.	.	.																																																													.	.	.	.
Template Sequence		K	T	I	Y	I	A	.	.	.	G	L	G	L	.	.	.	I	G	G	S	L	A	L	G	I	K	R	D	H	P	D	Y	E	I	L	G	Y	N	R	S	D	Y	S	R	N	I	A	L	E	R	G	I	V	D	R	A	T	G	D	F	K	E	F	A	P	L	A	D	V	I	I	L	A	V	P	I	.	.	.	.
Template Known Secondary structure							S	.	.	.			S		.	.	.											T	T		T	T	S							S											T		S		S				S						G	G	G		S						S			.	.	.	.
Template Predicted Secondary structure								.	.	.					.	.	.																																																													.	.	.	.
Template SS confidence
		4	.	.	.	.	.				10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	P	K	I	A	G	L	V	E	E	M	T	G	L	R	F	R	N	K	R	A	S	A	F	G	S	H	G	W	S	G	G	A	V	D	R	L	S	T	R	L	Q	D	A	G	F	E	M	S	L
Query Conservation
Alig confidence		.	.																												.
Template Conservation		.	.																												.
Template Sequence		.	.	K	Q	T	X	A	Y	L	K	E	L	A	D	L	D	L	K	D	N	V	I	I	T	D	A	G	S	T	.	K	R	E	I	V	E	A	A	E	R	Y	L	T	G	K	N	V	Q	F	V	G
Template Known Secondary structure		.	.											T	T	S				T	T								S		.													T	T	S	S
Template Predicted Secondary structure		.	.																												.
Template SS confidence
				74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions