Job Description Q46877 Confidence 99.08% Date Thu Jan 5 12:35:29 GMT 2012 Rank 124 Aligned Residues 196 % Identity 19% Template c3bv6D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:metal-dependent hydrolase; PDBTitle: crystal structure of uncharacterized metallo protein from vibrio2 cholerae with beta-lactamase like fold Resolution 1.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.											.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.														.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.														.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query Sequence		I	H	W	V	G	Q	R	D	W	E	V	R	D	F	H	G	T	E	Y	K	T	L	R	G	S	S	Y	N	S	Y	L	I	R	.	.	E	E	K	N	V	L	I	D	T	V	D	H	K	.	.	.	.	.	.	.	.	.	.	F	S	R	E	F	V	Q	N	L	R	N	E	I	.	.	.	.	.	.	.	.	.
Query Conservation																																			.	.														.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.														.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	W	W	L	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	I	W	L	K	S	A	G	N	T	N	L	S	I	D	F	W	C	G	T	G	K	K	T	Q	K	N	R	L	M	N	T	Q	H	Q	M	M	R	M	G	G	V	E	A	L	Q	P	N	L	R	T	S
Template Known Secondary structure							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T							S						S				S				B			T	T											B						B		S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.																						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
									68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																												.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																												.	.	.	.
Query Sequence		.	.	.	.	.	.	.	D	L	A	D	I	D	Y	I	V	I	N	H	A	E	E	D	H	A	G	A	L	T	E	L	M	A	Q	.	.	.	.	I	P	D	T	P	I	Y	C	T	A	N	A	I	D	S	I	N	G	H	H	H	H	P	E	W	N	F	N	V	V	K	T	G	D	T	L	D	I	G	N	G	K
Query Conservation		.	.	.	.	.	.	.																												.	.	.	.
Alig confidence		.	.	.	.	.	.	.																			.									.	.	.	.																				.																					.	.
Template Conservation																											.																																.																					.	.
Template Sequence		I	F	P	L	D	P	F	A	I	K	E	I	D	A	V	L	A	S	H	D	H	A	D	H	I	.	D	V	N	V	A	A	A	V	L	Q	N	C	G	E	H	V	K	F	I	G	P	Q	A	C	V	D	L	W	L	G	W	.	G	V	P	Q	E	R	C	I	V	A	K	V	G	D	V	L	E	I	G	D	.	.
Template Known Secondary structure					S		G	G	G					S					S	B		S	G	G	G		.												S		T	T																	.	T			G	G	G						T	T						T	T	.	.
Template Predicted Secondary structure																											.																																.																					.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.																									.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	I	F	V	E	T	P	M	L	H	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	S	M	M	T	Y	L	T	G	D	A	V	L	F	S	N	D	A	F	G	Q	H	Y	C	D	E	H	L	F	N	D	E	V	D	Q	T	E	L	F	E	Q	C	Q
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	V	K	I	R	V	L	D	S	F	D	R	T	A	L	V	T	L	P	K	G	V	S	S	Y	D	K	A	I	L	D	G	M	D	E	R	A	V	N	Y	L	I	E	T	S	G	G	S	V	Y	H	S	G	D	S	.	.	.	.	.	.	.	.	.	.	.	.	H	Y	S	N	Y	Y	A	K	H	G	N	D	Y
Template Known Secondary structure		.															T				T	T	S		S	S		G	G	G	G	G						B								T	T							T	T		.	.	.	.	.	.	.	.	.	.	.	.				T	T								S
Template Predicted Secondary structure		.																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.													.	230	.	.	.	.	.	.	.	.	.	240	.
		193	.	.	.	.	.	.									200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.																													.	.	.
Query SS confidence									.	.	.	.	.	.	.	.																													.	.	.
Query Sequence		R	Y	Y	A	N	I	L	.	.	.	.	.	.	.	.	T	P	F	S	R	L	V	T	P	K	I	T	E	I	L	G	F	N	L	P	V	D	M	I	A	T	S	H	.	.	.	G	V	V	W	R	D	N	P	T	Q	I	V	E	L	Y	L	K
Query Conservation									.	.	.	.	.	.	.	.																													.	.	.
Alig confidence									.	.	.	.	.	.	.	.																	.	.											.	.	.
Template Conservation																																	.	.
Template Sequence		Q	I	D	V	A	L	L	S	Y	G	E	N	P	R	G	V	T	D	K	M	T	S	S	D	V	L	R	A	A	E	S	.	.	L	D	C	Q	V	V	V	P	F	H	H	D	I	W	A	N	F	Q	N	D	P	R	E	I	E	V	L	W	N	M
Template Known Secondary structure				S						B					T	T				S	B												.	.		T		S						S	T	T	S	B	G	G	G				T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions