Job Description Q46877 Confidence 99.96% Date Thu Jan 5 12:35:29 GMT 2012 Rank 28 Aligned Residues 206 % Identity 16% Template c2yz3B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:metallo-beta-lactamase; PDBTitle: crystallographic investigation of inhibition mode of the2 vim-2 metallo-beta-lactamase from pseudomonas aeruginosa3 with mercaptocarboxylate inhibitor Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.								.										.
Query SS confidence																																				.	.								.										.
Query Sequence		S	I	V	V	K	N	N	I	H	W	V	G	Q	R	D	W	E	V	R	D	F	H	G	T	E	Y	K	T	L	R	G	S	S	Y	.	.	N	S	Y	L	I	R	E	.	E	K	N	V	L	I	D	T	V	.	D	H	K	F	S	R	E	F	V	Q	N	L	R	N	E	I	D	L	A	D	I	D	Y	I	V	I
Query Conservation																																				.	.								.										.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.												.	.								.										.																		.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Template Sequence		L	Y	Q	I	A	D	G	V	W	S	H	.	.	.	.	.	.	.	.	.	.	.	.	I	A	T	Q	S	F	D	G	A	V	Y	P	S	N	G	L	I	V	R	D	G	D	E	L	L	L	I	D	T	A	W	G	A	K	N	T	A	A	L	L	A	E	I	E	K	Q	I	G	.	L	P	V	T	R	A	V	S
Template Known Secondary structure							T	T					.	.	.	.	.	.	.	.	.	.	.	.							T	T													T	T						S			S	S															T		.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.													.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	A	E	E	D	H	A	G	A	L	T	E	L	M	A	Q	I	P	D	T	P	I	Y	C	T	A	N	A	I	D	S	I	N	G	H	H	H	H	P	E	W	N	F	N	V	V	K	T	G	D	T	L	D	I	G	N	G	K	Q	L	I	F	V	E	T	P	M	L	H	W	P	D	S	M	M	T	Y	L	T
Query Conservation
Alig confidence																			.	.																																																		.
Template Conservation																			.	.																																																		.
Template Sequence		T	H	F	H	D	D	R	V	G	G	V	D	V	L	R	A	A	.	.	G	V	A	T	Y	A	S	P	S	T	R	R	L	A	E	V	E	G	N	E	I	P	T	H	S	L	E	G	L	S	S	S	G	D	A	V	R	F	G	P	V	E	L	F	Y	P	G	A	A	.	H	S	T	D	N	L	V	V	Y	V	P
Template Known Secondary structure		S	S	S	S					T	T							T	.	.	T																	T					S					S		S	S	T	T						T	T								S	S	.	S	S	T	T							T
Template Predicted Secondary structure																			.	.																																																		.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	A	V	L	F	S	N	D	A	F	G	Q	H	Y	C	D	E	H	L	F	N	D	E	V	D	Q	T	E	L	F	E	Q	C	Q	R	Y	Y	A	N	I	L	T	P	F	S	R	L	V	T	P	K	I	T	E	I	L	G	F	N	L	P	V	D	M	I	A	T	S	H	G	V	V	W	R	D	N	P	T	Q
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	S	V	L	Y	G	G	C	A	I	Y	E	L	S	R	T	S	A	G	N	V	A	D	A	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	W	P	T	S	I	E	R	I	Q	Q	H	Y	P	E	A	Q	F	V	I	P	G	H	G	L	P	G	G	L	D	L	L	K
Template Known Secondary structure		T	T	T						T	T	S			T	T			S					T	T			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T													T	T		S					S	S	S			B		T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		238	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	E	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	T	T	N	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions