Job Description Q46877 Confidence 99.10% Date Thu Jan 5 12:35:29 GMT 2012 Rank 121 Aligned Residues 111 % Identity 20% Template c2x2oA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:nrdi protein; PDBTitle: the flavoprotein nrdi from bacillus cereus with the2 initially oxidized fmn cofactor in an intermediate3 radiation reduced state Resolution 1.13 Å

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		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		I	T	I	F	Y	D	T	M	S	N	N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	V	K	I	F	N	V	A	R	S	D	K	N	E	I	L	T	N	V	F	R	S	K	G	V	L	V	G	T	S	T	M	N	.	N	V	M	M	P	K	I	A	G	L	V	E	E	M	T	G
Query Conservation																																																																	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	V	A	Y	D	S	M	T	G	N	V	K	R	F	I	H	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	M	P	A	V	Q	I	D	E	D	L	V	I	D	E	D	F	I	L	I	T	Y	T	T	G	F	G	N	V	P	E	R	V	L	D	F	L	E	R	N	N	E
Template Known Secondary structure									S	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S							S	S					S									B	T	T	T	B													G	G
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.																				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		333	.	.	.	.	.	.	340	.	.	.	.	.					.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure															.	.	.	.			.
Query SS confidence															.	.	.	.			.
Query Sequence		L	R	F	R	N	K	R	A	S	A	F	G	S	.	.	.	.	H	G	.	W	S	G	G	A	V	D	R	L	S	T	R	L	Q	D	A	G	F	E	M	S	L	S	L	K	A	K	W	R	P	D	Q	D	A	L	K	L	C	R	E	H	G	R	E	I	A
Query Conservation															.	.	.	.			.
Alig confidence		.	.	.	.	.									.	.	.	.			.														.	.	.	.	.
Template Conservation		.	.	.	.	.																													.	.	.	.	.
Template Sequence		.	.	.	.	.	K	L	K	G	V	S	A	S	G	N	R	N	W	G	D	M	F	G	A	S	A	D	K	I	S	T	K	Y	.	.	.	.	.	E	V	P	I	V	S	K	F	E	L	S	G	T	N	N	D	V	E	Y	F	K	E	R	V	R	E	I	A
Template Known Secondary structure		.	.	.	.	.	G										G	G	G	G	G	G	T	T											.	.	.	.	.	T									T	T
Template Predicted Secondary structure		.	.	.	.	.																													.	.	.	.	.
Template SS confidence
							62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions