Job Description Q46877 Confidence 99.51% Date Thu Jan 5 12:35:29 GMT 2012 Rank 91 Aligned Residues 113 % Identity 22% Template c2wc1A_ PDB info PDB header:electron transport Chain: A: PDB Molecule:flavodoxin; PDBTitle: three-dimensional structure of the nitrogen fixation2 flavodoxin (niff) from rhodobacter capsulatus at 2.2 a Resolution 2.17 Å

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		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.										.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.
Query Sequence		D	R	I	T	I	F	Y	D	T	M	S	N	N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	V	K	I	F	N	V	A	R	S	D	K	N	E	I	L	T	N	V	F	R	S	K	G	V	L	V	G	T	S	T	M	N	N	V	M	M	P	.	.	.	.	.	.	.	.	.	K
Query Conservation																																																																								.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.													.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.													.	.	.	.
Template Sequence		A	K	I	G	L	F	F	G	S	D	T	G	T	T	R	K	I	A	K	Q	I	K	D	M	F	D	D	E	V	.	.	.	M	A	K	P	L	N	V	N	R	A	D	V	.	.	.	.	A	D	F	M	A	Y	D	F	L	I	L	G	T	P	T	L	G	D	G	Q	L	P	G	L	S	A	N	A	A	S	E	S
Template Known Secondary structure			S								S	S	S											T	T	S		T	T	T	.	.	.	B						G	G	G				.	.	.	.							S									B	T	T	T	B		S	S	G	G	G	T		S	S
Template Predicted Secondary structure																															.	.	.													.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.						.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																								.	.	.	.	.				.
Query SS confidence																								.	.	.	.	.				.
Query Sequence		I	A	G	L	V	E	E	M	T	G	L	R	F	R	N	K	R	A	S	A	F	G	.	.	.	.	.	S	H	G	.	W	S	G	G	A	V	D	R	L	S	T	R	L	Q	D	A	G	F	E	M	S	L	S	L
Query Conservation																								.	.	.	.	.				.
Alig confidence																								.	.	.	.	.				.
Template Conservation
Template Sequence		W	E	E	F	L	P	R	I	A	D	Q	D	F	S	G	K	T	I	A	L	F	G	L	G	D	Q	V	T	Y	P	L	E	F	V	N	A	L	F	F	L	H	E	F	F	S	D	R	G	A	N	V	V	G	R	W
Template Known Secondary structure						G	G	G	G	T	T				T	T											T	T	T		T	T	S	T	T	T											T	T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions