Job Description Q46877 Confidence 100.00% Date Thu Jan 5 12:35:29 GMT 2012 Rank 5 Aligned Residues 389 % Identity 39% Template c2ohiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:type a flavoprotein fpra; PDBTitle: crystal structure of coenzyme f420h2 oxidase (fpra), a diiron2 flavoprotein, reduced state Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																											.																									.	.	.
Query SS confidence																																											.																									.	.	.
Query Sequence		S	I	V	V	K	N	N	I	H	W	V	G	Q	R	D	W	E	V	R	D	F	H	G	T	E	Y	K	T	L	R	G	S	S	Y	N	S	Y	L	I	R	E	.	E	K	N	V	L	I	D	T	V	D	H	K	F	S	R	E	F	V	Q	N	L	R	N	E	.	.	.	I	D	L	A	D	I	D	Y	I	V	I
Query Conservation																																											.																									.	.	.
Alig confidence																										.	.	.															.																									.	.	.
Template Conservation																										.	.	.
Template Sequence		A	K	R	I	S	D	G	V	Y	W	T	G	V	L	D	W	D	L	R	N	Y	H	G	Y	.	.	.	T	L	Q	G	T	T	Y	N	A	Y	L	V	C	G	D	E	G	V	A	L	I	D	N	S	Y	P	G	T	F	D	E	L	M	A	R	V	E	D	A	L	Q	Q	V	G	M	E	R	V	D	Y	I	I	Q
Template Known Secondary structure							T	T									S	S			B	S	S	S		.	.	.	B		S												S	S									S	T	T																	T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		N	H	A	E	E	D	H	A	G	A	L	T	E	L	M	A	Q	I	P	D	T	P	I	Y	C	T	A	N	A	I	D	S	I	N	G	H	H	.	H	H	P	E	W	N	F	N	V	V	K	T	G	D	T	L	D	I	G	N	G	K	Q	L	I	F	V	E	T	P	M	L	H	W	P	D	S	M	M	T	Y	L
Query Conservation																																							.
Alig confidence																																							.																				.
Template Conservation																																																											.
Template Sequence		N	H	V	E	K	D	H	S	G	V	L	V	E	L	H	R	R	F	P	E	A	P	I	Y	C	T	E	V	A	V	K	G	L	L	K	H	Y	P	S	L	R	E	A	E	F	M	T	V	K	T	G	D	V	L	D	L	G	.	G	K	T	L	T	F	L	E	T	P	L	L	H	W	P	D	S	M	F	T	L	L
Template Known Secondary structure		S			S					T	T									T	T																		G	G	G	G	G								T	T						S	.	S									T	T	S	S		T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		T	G	D	A	V	L	F	S	N	D	A	F	G	Q	H	Y	C	D	E	H	L	F	N	D	E	V	D	Q	T	E	L	F	E	Q	C	Q	R	Y	Y	A	N	I	L	T	P	F	S	R	L	V	T	P	K	I	T	E	I	L	G	F	N	L	.	.	P	V	D	M	I	A	T	S	H	G	V	V	W	R	D	N
Query Conservation																																																																.	.
Alig confidence																																																																.	.															.
Template Conservation																																																																																.
Template Sequence		D	E	D	G	I	L	F	S	N	D	A	F	G	Q	H	L	C	C	P	Q	R	L	D	R	E	I	P	E	Y	I	L	M	D	A	A	R	K	F	Y	A	N	L	I	T	P	L	S	K	L	V	L	K	K	F	D	E	V	K	E	L	G	L	L	E	R	I	Q	M	I	A	P	S	H	G	Q	I	W	T	.	D
Template Known Secondary structure		T	T	T	T					T	T	T	T							S			B	G	G	G	S																	T	G	G	G														T	T		S	T	T							S	S	S		B	B	S	.	S
Template Predicted Secondary structure																																																																																.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	Q	I	V	E	L	Y	L	K	W	A	A	D	Y	Q	E	D	R	I	T	I	F	Y	D	T	M	S	N	N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	V	K	I	F	N	V	A	R	S	D	K	N	E	I	L	T	N	V	F	R	S	K	G	V	L	V	G	T	S	T
Query Conservation
Alig confidence																																																.	.
Template Conservation																																																.	.
Template Sequence		P	M	K	I	I	E	A	Y	T	G	W	A	T	G	M	V	D	E	R	V	T	V	I	Y	D	T	M	H	G	S	T	R	K	M	A	H	A	I	A	E	G	A	M	S	E	G	.	.	V	D	V	R	V	Y	C	L	H	E	D	D	R	S	E	I	V	K	D	I	L	E	S	G	A	I	A	L	G	A	P	T
Template Known Secondary structure														T	T				S									S	S	S																T	T	.	.								T	T	T	S											T		S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.				.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		M	N	N	V	M	M	P	K	I	A	G	L	V	E	E	M	T	G	.	.	.	L	R	F	R	N	K	R	A	S	A	F	G	S	H	G	W	S	G	G	A	V	D	R	L	S	T	R	L	Q	D	A	G	F	E	M	S	L	S	L	K	A	K	W	R	P	D	Q	D	A	L	K	L	C	R	E	H	G	R	E
Query Conservation																				.	.	.
Alig confidence																				.	.	.
Template Conservation
Template Sequence		I	Y	D	E	P	Y	P	S	V	G	D	L	L	M	Y	L	R	G	L	K	F	N	R	T	L	T	R	K	A	L	V	F	G	S	M	G	G	N	G	G	A	T	G	T	M	K	E	L	L	A	E	A	G	F	D	V	A	C	E	E	E	V	Y	Y	V	P	T	G	D	E	L	D	A	C	F	E	A	G	R	K
Template Known Secondary structure			T	T				T														G	G	G	T												S	S	S														T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		392	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	R	Q	W	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	A	E	I	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions