Job Description Q46877 Confidence 99.56% Date Thu Jan 5 12:35:29 GMT 2012 Rank 89 Aligned Residues 201 % Identity 13% Template c2az4A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ef2904; PDBTitle: crystal structure of a protein of unknown function from enterococcus2 faecalis v583 Resolution 2.00 Å

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		36	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.																							.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure									.												.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.												.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	S	Y	L	I	R	E	.	E	K	N	V	L	I	D	T	V	D	H	.	.	.	.	.	K	F	S	R	E	F	V	Q	N	L	R	N	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	A	D	I	D	Y	I	V	I	N	H	A	E	E	D	H	A	G	A
Query Conservation									.												.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.												.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	I	E	V	A	Y	K	D	A	H	I	F	F	D	F	G	T	E	F	R	P	E	L	D	L	P	D	D	H	I	E	T	L	I	N	N	R	L	V	P	E	L	K	D	L	Y	D	P	R	L	G	Y	E	Y	H	G	A	E	D	K	D	Y	Q	H	T	A	V	F	L	S	H	A	H	L	D	H	S	R	M
Template Known Secondary structure									T	T													T	T				S										T	T	S	S				S	S		B		G	G	G						S	S						S							S		S						T	T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.														120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	E	L	M	A	Q	I	P	D	T	P	I	Y	C	T	A	N	A	I	D	S	I	N	G	H	H	H	H	P	E	W	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	N	V	V	K	T	G	D	T	L	D	I	G	N	G	K	Q	L	I	F	V	E	T	P	M	L	H	W	P	D	S	M	M	T
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.																.											.
Template Conservation							.	.	.																																																					.											.
Template Sequence		I	N	Y	L	D	.	.	.	P	A	V	P	L	Y	T	L	K	E	T	K	M	I	L	N	S	L	N	R	K	G	D	F	L	I	P	S	P	F	E	E	K	N	F	T	R	E	M	I	G	L	N	K	N	D	V	I	K	V	G	E	.	I	S	V	E	I	V	P	V	D	H	.	D	A	Y	G	A	S	A	L
Template Known Secondary structure		G	G	G	B		.	.	.	T	T	S																T	T	T	S		S	S				T	T	S		T	T										T	T						T	T	.											.	S	S	T	T
Template Predicted Secondary structure							.	.	.																																																					.											.
Template SS confidence
		101	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.
		155	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		Y	L	T	G	D	A	.	.	V	L	F	S	N	D	A	F	G	Q	H	Y	C	D	E	H	L	F	N	D	E	V	D	Q	T	E	L	F	E	Q	C	Q	R	Y	Y	A	N	I	L	T	P	F	S	R	L	V	T	P	K	I	T	E	I	L	G	F	N	L	P	V	D	M	I	A	T	S	H	G	V	V	W	R
Query Conservation								.	.
Alig confidence								.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		L	I	R	T	P	D	H	F	I	T	Y	T	G	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	H	G	H	N	R	E	E	T	L	A	F	C	E	K	A	K	H	.	.	T	E	L	L	M	M	E	G	V	S	I	S	F	P	E
Template Known Secondary structure						T	T								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	T	T												T	T	.	.		S								G	G	G	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190																														.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		233	.	.											.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.
Query Sequence		D	N	P	.	.	.	.	.	.	.	.	.	.	T	Q	I	V	E	L	Y	L	K	W	A	A	D	Y	Q	E	D	R	I	T	I	F	Y	D	T	M	S	N	N	T	R	M	M	A	D	A	I	A	Q
Query Conservation					.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																								.	.
Template Sequence		R	E	P	D	P	A	Q	I	A	V	V	S	E	E	D	L	V	Q	H	L	V	R	L	E	L	E	N	P	N	R	Q	I	T	F	N	G	Y	P	.	.	A	N	V	E	R	F	A	K	I	I	E	K
Template Known Secondary structure						T	T	B					S														T		S	S	S								T	.	.	T
Template Predicted Secondary structure																																								.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions