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Job DescriptionQ46877
Confidence100.00%DateThu Jan 5 12:35:29 GMT 2012
Rank1Aligned Residues394
% Identity41%Templatec1ychD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:nitric oxide reductase; PDBTitle: x-ray crystal structures of moorella thermoacetica fpra.2 novel diiron site structure and mechanistic insights into3 a scavenging nitric oxide reductase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEKNVLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAE
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Template Sequence  PVAITDGIYWVGAVDWNIRYFHGPAFSTHRGTTYNAYLIVDDKTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTE
Template Known Secondary structure 
TT

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TTTT
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SSS




GGGTTSSS


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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EDHAGALTELMAQIPDTPIYCTANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDAV
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Template Sequence  SDHAGAFPAIMELCPDAHVLCTQRAFDSLKAHYSHIDFNYTIVKTGTSVSLG. KRSLTFIEAPMLHWPDSMFTYVPEEAL
Template Known Secondary structure  TT
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T
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GGGT
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   84.....90.........100.........110.........120.........130..... ....140.........150.........160..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  LFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNLPVDMIATSHGVVWRDNPTQIVEL
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Template Sequence  LLPNDAFGQHIATSVRFDDQVDAGLIMDEAAKYYANILMPFSNLITKKLDEIQKINLAIKTIAPSHGIIWRKDPGRIIEA
Template Known Secondary structure  TTT





S

BGGGS
TGGGTT


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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  YLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGIAETDPRVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMP
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Template Sequence  YARWAEGQGKAKAVIAYDTMWLSTEKMAHALMDGLVAGG. . CEVKLFKLSVSDRNDVIKEILDARAVLVGSPTINNDILP
Template Known Secondary structure  T


S

SSSTT..
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   243......250.........260.........270.........280. ........290.........300.........310.........320
 
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Query Sequence  KIAGLVEEMTGLRFRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMS. . LSLKAKWRPDQDALKLCREHGREIARQWAL
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Template Sequence  VVSPLLDDLVGLRPKNKVGLAFGAYGWGGGAQKILEERLKAAKIELIAEPGPTVQWVPRGEDLQRCYELGRKIAARIAD
Template Known Secondary structure  GG

SS
SSS

TT
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   321........330.........340.........350.........360.........370.........380.........390.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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