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Job DescriptionQ46877
Confidence100.00%DateThu Jan 5 12:35:29 GMT 2012
Rank3Aligned Residues385
% Identity24%Templatec1vmeB_
PDB info PDB header:electron transportChain: B: PDB Molecule:flavoprotein; PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2...... .10.........20.........30.........40. ........50.........60.........70........
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Query Sequence  SIVVKNN. . IHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIR. EEKNVLIDTVDHKFSREFVQNLRNEIDLADIDYIVIN
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Template Sequence  TERIFDDPEIYVLRIDDDRIRYFE. AVWEIPEGISYNAYLVKLNGANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVN
Template Known Secondary structure  TTT
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T.TT
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GGGTTS
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   6...10.........20......... 30.........40.........50.........60.........70.........80....
 
   7980.........90.... .....100.........110.........120.........130.........140.........150.......
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Query Sequence  HAEEDHAGALTELMAQ. IPDTPIYCTANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLT
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Template Sequence  HTEPDHSGSLPATLKTIGHDVEIIASNFGKRLLEGFYG. . IKDVTVVKDGEEREIG. GKKFKFVXTPWLHWPDTXVTYLD
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   85....90.........100.........110.........120.. .......130........ .140.........150.........160.
 
   158.160.........170......... 180.........190.........200.........210.........220.........230......
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Query Sequence  GDAVLFSNDAFGQHYCDEHLFN. DEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNLPVDMIATSHGVVWRDNPT
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Template Sequence  . . GILFSCDVGGGYLLPEILDDSNESVVERYLPHVTKYIVTVIGHYKNYILEGAEKLSS. . LKIKALLPGHGLIWKKDPQ
Template Known Secondary structure  ..TTTT

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   162.......170.........180.........190.........200.........210........ .220.........230.......
 
   237..240.........250 .........260.........270.........280.... .....290.........300.........310....
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Query Sequence  QIVELYLKWAADYQ. EDRITIFYDTMSNNTRMMADAIAQGIAETDPRVA. VKIFNVARSDKNEILTNVFRSKGVLVGTST
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Template Sequence  RLLNHYVSVAKGDPKKGKVTVIYDSXYGFVENVXKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDIPDSEALIFGVST
Template Known Secondary structure  T


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   238.240.........250.........260.........270.........280.........290.........300.........310.......
 
   315....320.........330.........340.........350.........360.........370....... ..380.........390...
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Query Sequence  MNNVMMPKIAGLVEEMTGLRFRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRP. DQDALKLCREHGREIA
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Template Sequence  YEAEIHPLXRFTLLEIIDKANYEKPVLVFGVHGWAPSAERTAGELLKETKFRILSFTEIKGSNXDERKIEEAISLLKKEL
Template Known Secondary structure  TT










TTS

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   318.320.........330.........340.........350.........360.........370.........380.........390.......
 
   394
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Query Sequence  R
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Template Sequence  E
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   398
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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