Return to main results Retrieve Phyre Job Id

Job DescriptionQ46877
Confidence22.83%DateThu Jan 5 12:35:29 GMT 2012
Rank398Aligned Residues47
% Identity9%Templatec1q8iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dna polymerase ii; PDBTitle: crystal structure of escherichia coli dna polymerase ii
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   351........360........ .370.........380.........390........
Predicted Secondary structure 


....



Query SS confidence 

















. . . .





























Query Sequence  GAVDRLSTRLQDAGFEMS. . . . LSLKAKWRPDQDALKLCREHGREIARQWAL
Query Conservation   
   
   
   
  
 ....        
 



    
 

 

  
  
Alig confidence 

















....






.





















Template Conservation    
      

  
  










  .            
  
   

 
Template Sequence  QIMRQTKALIEAQGYDVIYGDTDSTFVWL. KGAHSEEEAAKIGRALVQHVNA
Template Known Secondary structure  TT

SS
.SS


Template Predicted Secondary structure 






.




Template SS confidence 



















































   525....530.........540.........550... ......560.........570.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions