Job Description Q46877 Confidence 22.58% Date Thu Jan 5 12:35:29 GMT 2012 Rank 403 Aligned Residues 122 % Identity 14% Template c1nl3B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:preprotein translocase seca 1 subunit; PDBTitle: crystal structure of the seca protein translocation atpase2 from mycobacterium tuberculosis in apo form Resolution 2.80 Å

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.										.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.												.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.												.	.	.	.	.	.	.	.	.
Query Sequence		F	E	Q	C	Q	R	Y	Y	A	N	I	L	T	P	F	S	R	L	V	T	P	K	I	T	E	I	L	G	F	N	L	P	V	D	M	I	A	T	S	H	G	V	V	W	R	D	N	.	P	T	Q	I	V	E	L	Y	L	K	W	.	.	.	.	.	.	.	.	.	A	A	D	Y	Q	E	D	R	I	T	I	F
Query Conservation																																																	.												.	.	.	.	.	.	.	.	.
Alig confidence																																			.														.												.	.	.	.	.	.	.	.	.
Template Conservation																																			.
Template Sequence		L	Q	N	Y	F	R	L	Y	D	K	L	A	G	M	T	G	T	A	Q	T	E	A	A	E	L	H	E	I	Y	K	L	G	V	.	V	S	I	P	T	N	M	P	M	I	R	E	D	Q	S	D	L	I	Y	K	T	E	E	A	K	Y	I	A	V	V	D	D	V	A	E	R	Y	A	K	G	Q	P	V	L	I	G
Template Known Secondary structure							T	T		S							S			G	G	G													.						S	S													S	S																			T
Template Predicted Secondary structure																																			.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		Y	D	T	M	S	N	N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	V	K	I	F	N	V	A	.	R	S	D	K	N	E	I	L	T	N	V	F	R	S	K	G	V	L	V	G	T	S	T	M	N	N	V
Query Conservation																																				.
Alig confidence						.	.	.	.	.															.	.										.																						.
Template Conservation						.	.	.	.	.															.	.																																.
Template Sequence		T	T	S	V	.	.	.	.	.	E	R	S	E	Y	L	S	R	Q	F	T	K	R	R	.	.	I	P	H	N	V	L	N	A	K	Y	H	E	Q	E	A	T	I	I	A	V	A	G	R	R	G	G	V	T	V	A	T	.	N	M	A	G	R
Template Known Secondary structure			S			.	.	.	.	.												T	T	T	.	.								S	S	S										T	T	T	S	T	T							.	T	T		S	T
Template Predicted Secondary structure						.	.	.	.	.															.	.																																.
Template SS confidence
		437	.	.	440						.	.	.	.	.	.	.	.	.	450	.	.	.	.			.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.		.	.	.	.	490

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions