 |
Job Description | Q46877 | Confidence | 96.85% | Date | Thu Jan 5 12:35:29 GMT 2012 |
Rank | 158 | Aligned Residues | 69 |
% Identity | 12% | Template | c1hfeL_ |
PDB info |
PDB header:hydrogenase | Chain: L: PDB Molecule:protein (fe-only hydrogenase (e.c.1.18.99.1) |
PDBTitle: 1.6 a resolution structure of the fe-only hydrogenase from2 desulfovibrio desulfuricans
|
Resolution | 1.60 Å |
|
 |
  |   |
408 | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | |
. | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | V | V | K | E | E | T | S | A | T | T | T | A | D | L | G | P | R | M | Q | C | S | V | C | Q | W | I | Y | D | P | A | K | G | E | P | M | Q | D | V | A | P | G | T | P | W | S | E | V | . |
P | D | N | F | L | C | P | E | C | S | L | G | K | D | V | F | E | E | L | A | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |   |
|
|   |   |
|
|
Template Sequence |   |
E | M | H | T | P | D | P | K | A | D | P | D | K | L | H | F | V | Q | I | D | E | A | K | C | I | G | C | D | T | C | S | Q | Y | C | P | T | A | A | I | F | G | E | M | G | E | P | H | S | I | P | H | I | E | A | C | I | N | C | G | Q | C | L | T | H | C | P | E | N | A | I |
Template Known Secondary structure |   |
|
|
|
|
|
| T | T |
|
| G | G | G |
|
| S |  |  |  |
| T | T | T |
|
|
|
|
|  |  |  |  |  |
| T | T |
|
|
| B |
|
| T | T | S |
|
| B |
|
|
| G | G | G |
|
|
|
|
| T | T | G | G | G |
| T | T |
|
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|