Job Description Q46877 Confidence 100.00% Date Thu Jan 5 12:35:29 GMT 2012 Rank 4 Aligned Residues 393 % Identity 34% Template c1e5dA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:rubredoxin\:oxygen oxidoreductase; PDBTitle: rubredoxin oxygen:oxidoreductase (roo) from anaerobe2 desulfovibrio gigas Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	V	V	K	N	N	I	H	W	V	G	Q	R	D	W	E	V	R	D	F	H	G	T	E	Y	K	T	L	R	G	S	S	Y	N	S	Y	L	I	R	E	E	K	N	V	L	I	D	T	V	D	H	K	F	S	R	E	F	V	Q	N	L	R	N	E	I	D	L	A	D	I	D	Y	I	V	I	N	H	A	E
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		A	T	K	I	I	D	G	F	H	L	V	G	A	I	D	W	N	S	R	D	F	H	G	Y	.	T	L	S	P	M	G	T	T	Y	N	A	Y	L	V	E	D	E	K	T	T	L	F	D	T	V	K	A	E	Y	K	G	E	L	L	C	G	I	A	S	V	I	D	P	K	K	I	D	Y	L	V	I	Q	H	L	E
Template Known Secondary structure							T	T									T	T					T	T	T	.				T	T											S	S	S									G	G	G										T	T	S		G	G	G										S
Template Predicted Secondary structure																										.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	H	A	G	A	L	T	E	L	M	A	Q	I	P	D	T	P	I	Y	C	T	A	N	A	I	D	S	I	N	G	H	H	H	H	P	E	W	N	F	N	V	V	K	T	G	D	T	L	D	I	G	N	G	K	Q	L	I	F	V	E	T	P	M	L	H	W	P	D	S	M	M	T	Y	L	T	G	D	A	V
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		L	D	H	A	G	A	L	P	A	L	I	E	A	C	Q	P	E	K	I	F	T	S	S	L	G	Q	K	A	M	E	S	H	F	H	Y	K	D	W	P	V	Q	V	V	K	H	G	E	T	L	S	L	G	.	K	R	T	V	T	F	Y	E	T	R	M	L	H	W	P	D	S	M	V	S	W	F	A	D	E	K	V
Template Known Secondary structure						T	T											S																			S	S								T	T						S	.	S									T	T	S	S	S	T	T							T	T	T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		L	F	S	N	D	A	F	G	Q	H	Y	C	D	E	H	L	F	N	D	E	V	D	Q	T	E	L	F	E	Q	C	Q	R	Y	Y	A	N	I	L	T	P	F	S	R	L	V	T	P	K	I	T	E	I	L	G	F	N	L	P	V	D	M	I	A	T	S	H	G	V	V	W	R	.	.	D	N	P	T	Q	I	V
Query Conservation																																																																									.	.
Alig confidence																																																																									.	.
Template Conservation
Template Sequence		L	I	S	N	D	I	F	G	Q	N	I	A	A	S	E	R	F	S	D	Q	I	P	V	H	T	L	E	R	A	M	R	E	Y	Y	A	N	I	V	N	P	Y	A	P	Q	T	L	K	A	I	E	T	L	V	G	A	G	V	A	P	E	F	I	C	P	D	H	G	V	I	F	R	G	A	D	Q	C	T	F	A	V
Template Known Secondary structure						T	T	T							S			B	G	G	G	S																	T	G	G	G														T	T				S					S	S	S		B			S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	Y	L	K	W	A	A	D	Y	Q	E	D	R	I	T	I	F	Y	D	T	M	S	N	N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	V	K	I	F	N	V	A	R	S	D	K	N	E	I	L	T	N	V	F	R	S	K	G	V	L	V	G	T	S	T	M	N	N	V	M
Query Conservation
Alig confidence																																											.	.
Template Conservation																																											.	.
Template Sequence		Q	K	Y	V	E	Y	A	E	Q	K	P	T	N	K	V	V	I	F	Y	D	S	M	W	H	S	T	E	K	M	A	R	V	L	A	E	S	F	R	D	E	G	.	.	C	T	V	K	L	M	W	C	K	A	C	H	H	S	Q	I	M	S	E	I	S	D	A	G	A	V	I	V	G	S	P	T	H	N	N	G	I
Template Known Secondary structure														S									S	S	S																T	T	.	.								T	T	T	S											T		S									B	T	T	B
Template Predicted Secondary structure																																											.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		M	P	K	I	A	G	L	V	E	E	M	T	G	L	R	F	R	N	K	R	A	S	A	F	G	S	H	G	W	S	G	G	A	V	D	R	L	S	T	R	L	Q	D	A	G	F	E	M	S	.	L	S	L	K	A	K	W	R	P	D	Q	D	A	L	K	L	C	R	E	H	G	R	E	I	A	R	Q	W	A	L
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		L	P	Y	V	A	G	T	L	Q	Y	I	K	G	L	R	P	Q	N	K	I	G	G	A	F	G	S	F	G	W	S	G	E	S	T	K	V	L	A	E	W	L	T	G	M	G	F	D	M	P	A	T	P	V	K	V	K	N	V	P	T	H	A	D	Y	E	Q	L	K	T	M	A	Q	T	I	A	R	A	L	K	A
Template Known Secondary structure															T				S										S	S	S														T	T		B			S							S	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions