Job Description P0AAF1 Confidence 3.06% Date Thu Jan 5 11:12:44 GMT 2012 Rank 85 Aligned Residues 169 % Identity 12% Template c3aqpB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: crystal structure of secdf, a translocon-associated membrane protein,2 from thermus thrmophilus Resolution 3.30 Å

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	P	E	R	N	V	P	I	A	V	L	G	G	T	L	G	A	A	V	I	Y	I	V	S	T	N	V	I	A	G	I	V	P	N	M	E	L	A	N	S	T	A	P	F	G	L	A	F	A	Q	M	F	T	P	E	V	G	K	V	I	M	A	L	M	V	M	S	C	C	G	S	L	L	G	W	Q	F	T	I
Query Conservation
Alig confidence																																											.
Template Conservation																																											.
Template Sequence		Q	D	A	I	Q	A	G	I	R	S	A	L	I	G	T	L	A	I	F	L	L	I	F	A	Y	Y	G	P	H	L	G	L	V	A	S	L	G	L	L	Y	T	.	S	A	L	I	L	G	L	L	S	G	L	G	A	T	L	T	L	P	G	I	A	G	L	V	L	T	L	G	A	A	V	D	G	N	V	L	S	F
Template Known Secondary structure																												T															.
Template Predicted Secondary structure																																											.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	V	F	K	S	S	S	D	E	G	Y	F	P	K	I	F	S	R	V	T	K	V	D	A	P	V	Q	G	M	L	T	I	V	I	I	Q	S	G	L	A	L	M	T	I	S	P	S	L	N	S	Q	F	N	V	L	V	N	L	A	V	V	T	N	I	I	P	Y	I	L	S	M	A	A	L	V	I	I	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	I	K	E	E	L	R	A	G	K	K	L	R	Q	A	I	P	E	G	F	R	H	S	T	L	T	I	M	D	V	N	I	A	H	L	L	A	A	A	A	L	Y	Q	Y	A	T	G	P	V	R	G	F	A	V	I	L	A	I	G	V	V	A	S	V	F	S	N	L	V	F	S	R	H	L	L	E	R	L	A
Template Known Secondary structure										T	T																																			T			T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
		377	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	N	V	P	P	S	K	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	G	E	I	R	P	P	M	W
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		427	.	.	430	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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