Job Description P60472 Confidence 48.44% Date Thu Jan 5 12:06:50 GMT 2012
Rank 36 Aligned Residues 101
% Identity 18% Template c3n2xB_
PDB info
PDB header: lyaseChain: B: PDB Molecule: uncharacterized protein yage;
PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate
Resolution 2.20 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
47 . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
A K S V R R A V S F A A N N G I E A L T L Y A F S S E N W N R P A Q E V S A L M E L F V W A L D S E V K S L H R H N V R L R I I G D T S R F N S R L Q E R I R K
Query Conservation  
                                                                                                         
Alig confidence  
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Template Conservation  
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Template Sequence  
K P G T A A L I D D L I K A G V D G L F F L G S G G E F S Q L G A E E R K A I A R F A I D H V .
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D R R V P V L I .
G T G G T N A R E T I E L S Q H
Template Known Secondary structure  
T T S S S T T T T G G G S . . . . . . . . T T S S . S S
Template Predicted Secondary structure  
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Template SS confidence  
   
33 . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . .
80 . . . . . . .
. . 90 . . . . . . . . . 100 . . .
 
   
127 . . 130 . . . . . . . . . 140 . . . . .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
S E A L T A G N T G L T L N I A A N Y .
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G G R W D I V Q G V R Q L A E
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
A Q Q A G A D G .
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I V V I N P Y Y W K V S E A N L I R Y F E Q V A D
Template Known Secondary structure  
T S . . . . S S S
Template Predicted Secondary structure  
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Template SS confidence  
   
104 . . . . . 110 .
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]