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Job DescriptionP60472
Confidence48.44%DateThu Jan 5 12:06:50 GMT 2012
Rank36Aligned Residues101
% Identity18%Templatec3n2xB_
PDB info PDB header:lyaseChain: B: PDB Molecule:uncharacterized protein yage; PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90.........100.........110.........120......
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Query Sequence  AKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRK
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Template Sequence  KPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHV. . . . . . . . DRRVPVLI. GTGGTNARETIELSQH
Template Known Secondary structure  TT
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SSTTTTGGGS
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   33......40.........50.........60.........70......... 80....... ..90.........100...
 
   127..130.........140..... ....150.........160
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Query Sequence  SEALTAGNTGLTLNIAANY. . . GGRWDIVQGVRQLAE
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Template Sequence  AQQAGADG. . . . IVVINPYYWKVSEANLIRYFEQVAD
Template Known Secondary structure  T
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   104.....110. ........120.........130......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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