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Job Description | P60472 | Confidence | 19.42% | Date | Thu Jan 5 12:06:50 GMT 2012 |
Rank | 83 | Aligned Residues | 85 |
% Identity | 13% | Template | c3gqeA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:non-structural protein 3; |
PDBTitle: crystal structure of macro domain of venezuelan equine encephalitis2 virus
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Resolution | 2.30 Å |
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35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | G | K | I | R | A | F | G | H | K | A | G | A | K | S | V | R | R | A | V | S | F | A | A | N | N | G | I | E | A | L | T | L | Y | A | F | S | S | E | N | W | N | R | P | A | Q | E | V | S | A | L | M | E | L | F | V | W | A | L | D | S | E | V | K | S | L | H | R | H | N | V | R | L | R | I | I | G | D | T | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | K | V | S | E | V | E | G | D | K | Q | L | A | E | A | Y | E | S | I | A | K | I | V | N | D | N | N | Y | K | S | V | A | I | P | L | L | S | T | G | I | F | S | G | N | K | D | R | L | T | Q | S | L | N | H | L | L | T | A | L | D | . |
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T | T | D | A | D | V | A | I | Y | C | R | D | K |
Template Known Secondary structure |   |
T | T | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
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. | . | . | . | . | . | 140 | . | . | . | . | . | . |
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115 | . | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | F | N | S | R | L | Q | E | R | I | R | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | W | E | M | T | L | K | E | A | V | A | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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147 | . | . | 150 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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