Job Description P60472 Confidence 100.00% Date Thu Jan 5 12:06:50 GMT 2012 Rank 1 Aligned Residues 233 % Identity 41% Template c2vg2C_ PDB info PDB header:transferase Chain: C: PDB Molecule:undecaprenyl pyrophosphate synthetase; PDBTitle: rv2361 with ipp Resolution 1.95 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	H	G	C	R	H	V	A	I	I	M	D	G	N	G	R	W	A	K	K	Q	G	K	I	R	A	F	G	H	K	A	G	A	K	S	V	R	R	A	V	S	F	A	A	N	N	G	I	E	A	L	T	L	Y	A	F	S	S	E	N	W	N	R	P	A	Q	E	V	S	A	L	M	E	L	F	V	W	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	R	L	P	N	H	V	A	I	V	M	D	G	N	G	R	W	A	T	Q	R	G	L	A	R	T	E	G	H	K	M	G	E	A	V	V	I	D	I	A	C	G	A	I	E	L	G	I	K	W	L	S	L	Y	A	F	S	T	E	N	W	K	R	S	P	E	E	V	R	F	L	M	G	F	N	R	D	V	V
Template Known Secondary structure		G	G	G	S		S																T	T																									T											G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	E	V	K	S	L	H	R	H	N	V	R	L	R	I	I	G	D	T	S	R	F	N	S	R	L	Q	E	R	I	R	K	S	E	A	L	T	A	G	N	T	G	L	T	L	N	I	A	A	N	Y	G	G	R	W	D	I	V	Q	G	V	R	Q	L	A	E	K	V	Q	Q	G	N	L	Q	P	D	Q	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	R	R	D	T	L	K	K	L	G	V	R	I	R	W	V	G	S	R	P	R	L	W	R	S	V	I	N	E	L	A	V	A	E	E	M	T	K	S	N	D	V	I	T	I	N	Y	C	V	N	Y	G	G	R	T	E	I	T	E	A	T	R	E	I	A	R	E	V	A	A	G	R	L	N	P	E	R	I	T
Template Known Secondary structure											T	T							S			T	T	S																T	T			S																												T	T				G	G	G
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	M	L	N	Q	H	V	C	M	H	E	L	A	P	V	D	L	V	I	R	T	G	G	E	H	R	I	S	N	F	L	L	W	Q	I	A	Y	A	E	L	Y	F	T	D	V	L	W	P	D	F	D	E	Q	D	F	E	G	A	L	N	A	F	A	N	R	E	R	R	F	G	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	T	I	A	R	H	L	Q	R	P	D	I	P	D	V	D	L	F	L	R	T	S	G	E	Q	R	S	S	N	F	M	L	W	Q	A	A	Y	A	E	Y	I	F	Q	D	K	L	W	P	D	Y	D	R	R	D	L	W	A	A	C	E	E	Y	A	S	R	T	R	R	F	G	S	A
Template Known Secondary structure									S	S	S	T	T					S					S	T	T					T	T	T	T	T	T	T	T	T	T								S		G	G	G														T	T	S				T	T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions