Job Description P60472 Confidence 100.00% Date Thu Jan 5 12:06:50 GMT 2012 Rank 3 Aligned Residues 222 % Identity 33% Template c2vfwB_ PDB info PDB header:transferase Chain: B: PDB Molecule:short-chain z-isoprenyl diphosphate synthetase; PDBTitle: rv1086 native Resolution 2.3 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		H	G	C	R	H	V	A	I	I	M	D	G	N	G	R	W	A	K	K	Q	G	K	.	I	R	A	F	G	H	K	A	G	A	K	S	V	R	R	A	V	S	F	A	A	N	N	G	I	E	A	L	T	L	Y	A	F	S	S	E	N	W	N	R	P	A	Q	E	V	S	A	L	M	E	L	F	V	W	A	L	D
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		D	L	P	R	H	I	A	V	L	C	D	G	N	R	R	W	A	R	S	A	G	Y	D	D	V	S	Y	G	Y	R	M	G	A	A	K	I	A	E	M	L	R	W	C	H	E	A	G	I	E	L	A	T	V	Y	L	L	S	T	E	N	L	Q	R	D	P	D	E	L	A	A	L	I	E	I	I	T	D	V	V	E
Template Known Secondary structure					S																T	T		S		T																						T		S								B	T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		S	E	V	K	S	L	H	R	H	N	V	R	L	R	I	I	G	D	T	S	R	F	N	S	R	L	Q	E	R	I	R	K	S	E	A	L	T	A	G	N	T	G	L	T	L	N	I	A	A	N	Y	G	G	R	W	D	I	V	Q	G	V	R	Q	L	A	E	K	V	Q	Q	G	N	L	Q	P	D	Q	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence							.	.																																																																							.	.	.
Template Conservation							.	.
Template Sequence		E	I	C	A	P	.	.	A	N	H	W	S	V	R	T	V	G	D	L	G	L	I	G	E	E	P	A	R	R	L	R	G	A	V	E	S	T	P	E	V	A	S	F	H	V	N	V	A	V	G	Y	G	G	R	R	E	I	V	D	A	V	R	A	L	L	S	K	E	L	A	N	G	A	T	A	E	E	L	V	D
Template Known Secondary structure				T		T	.	.	T	T								S		G	G	G	S														T	S		S	S		S								S	B																				T	T							T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
			172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	D	E	E	M	L	N	Q	H	V	C	M	H	E	L	A	P	V	D	L	V	I	R	T	G	G	E	H	R	I	S	N	F	L	L	W	Q	I	A	Y	A	E	L	Y	F	T	D	V	L	W	P	D	F	D	E	Q	D	F	E	G	A	L	N	A	F	A	N	R
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	V	T	V	E	G	I	S	E	N	L	Y	T	S	G	Q	P	D	P	D	L	V	I	R	T	S	G	E	Q	R	L	S	G	F	L	L	W	Q	S	A	Y	S	E	M	W	F	T	E	A	H	W	P	A	F	R	H	V	D	F	L	R	A	L	R	D	Y	S	A	R
Template Known Secondary structure		T									T	S	T	T	T	T	S				S						T	T					T	T	T	T	T	T	T	T	T	T							S	S		G	G	G															T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions