 |
Job Description | P18200 | Confidence | 1.38% | Date | Thu Jan 5 11:36:45 GMT 2012 |
Rank | 98 | Aligned Residues | 22 |
% Identity | 45% | Template | c3n2oA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:biosynthetic arginine decarboxylase; |
PDBTitle: x-ray crystal structure of arginine decarboxylase complexed with2 arginine from vibrio vulnificus
|
Resolution | 2.30 Å |
|
  |   |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | I | R | W | F | D | R | N | V | H | G | G | M | G | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | I | D | D | I | V | A | G | V |
Query Conservation |   |
|
|   |   |   |
|   |   |
|   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
| . | . |
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|
Template Sequence |   |
N | I | T | Y | F | D | . |
. |
V | G | G | G | L | A | I | D | Y | D | G | T | R | S | Q | S | S | N | S | M | N | Y | G | L | V | E | Y | A | R | N | I | V | N | T | V |
Template Known Secondary structure |   |
|
|
|  |  |  | . | . |
|
| S |
| B |
|
|
| T | T | S |
|
|
| S | S | T | T | S |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
286 | . | . | . | 290 | . | |
|
. | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|