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Job DescriptionP0A884
Confidence100.00%DateThu Jan 5 11:07:10 GMT 2012
Rank7Aligned Residues263
% Identity100%Templated2g8oa1
SCOP infoThymidylate synthase/dCMP hydroxymethylase Thymidylate synthase/dCMP hydroxymethylase Thymidylate synthase/dCMP hydroxymethylase
Resolution1.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWD
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Template Sequence  KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWD
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TTSS
GGG





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T

BTTT

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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSC
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Template Sequence  EWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSC
Template Known Secondary structure  GG

TTSB

S
TTT

TT
S




GGGGGGSSS

STT
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  QLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD
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Template Sequence  QLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD
Template Known Secondary structure  TTTTT
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   242.......250.........260....
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Query Sequence  YRFEDFEIEGYDPHPGIKAPVAI
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Template Sequence  YRFEDFEIEGYDPHPGIKAPVAI
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   242.......250.........260....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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