Job Description P0A884 Confidence 100.00% Date Thu Jan 5 11:07:10 GMT 2012 Rank 16 Aligned Residues 259 % Identity 50% Template d1tisa_ SCOP info Thymidylate synthase/dCMP hydroxymethylase Thymidylate synthase/dCMP hydroxymethylase Thymidylate synthase/dCMP hydroxymethylase Resolution 2.70

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		M	K	Q	Y	L	E	L	M	Q	K	V	L	D	E	G	T	Q	K	N	D	R	T	G	T	G	T	L	S	I	F	G	H	Q	M	R	F	N	L	Q	D	G	F	P	L	V	T	T	K	R	C	H	L	R	S	I	I	H	E	L	L	W	F	L	Q	G	D	T	N	I	A	Y	L	H	E	N	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																																																													.	.	.	.	.
Template Conservation
Template Sequence		M	K	Q	Y	Q	D	L	I	K	D	I	F	E	N	G	Y	E	T	D	D	R	T	G	T	G	T	I	A	L	F	G	S	K	L	R	W	D	L	T	K	G	F	P	A	V	T	T	K	K	L	A	W	K	A	C	I	A	E	L	I	W	F	L	S	G	S	T	N	V	N	D	L	R	L	I	Q	H	D	S	L
Template Known Secondary structure														T	T							S	S		S														G	G	G							S	S																	T			B										S		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
				76	.	.	.	80	.	.									.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure		.	.								.	.	.	.	.	.	.	.
Query SS confidence		.	.								.	.	.	.	.	.	.	.
Query Sequence		.	.	N	V	T	I	W	D	E	.	.	.	.	.	.	.	.	W	A	D	E	N	G	D	L	G	P	V	Y	G	K	Q	W	R	A	W	P	T	P	D	G	R	H	I	D	Q	I	T	T	V	L	N	Q	L	K	N	D	P	D	S	R	R	I	I	V	S	A	W	N	V	G	E	L	D	K	M	A	L	A	P
Query Conservation		.	.								.	.	.	.	.	.	.	.
Alig confidence		.	.								.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																							.	.	.	.	.
Template Sequence		I	Q	G	K	T	V	W	D	E	N	Y	E	N	Q	A	K	D	L	G	Y	H	S	G	E	L	G	P	I	Y	G	K	Q	W	R	D	F	G	.	.	.	.	.	G	V	D	Q	I	I	E	V	I	D	R	I	K	K	L	P	N	D	R	R	Q	I	V	S	A	W	N	P	A	E	L	K	Y	M	A	L	P	P
Template Known Secondary structure		S	S	S			T	T					T	T	T	T	G	G	G	T			T	T	B			S									B	T	.	.	.	.	.	T	B													S	T	T		S			B						G	G	G	G	G	G		S	S
Template Predicted Secondary structure																																							.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.						.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	H	A	F	F	Q	F	Y	V	A	D	G	K	L	S	C	Q	L	Y	Q	R	S	C	D	V	F	L	G	L	P	F	N	I	A	S	Y	A	L	L	V	H	M	M	A	Q	Q	C	D	L	E	V	G	D	F	V	W	T	G	G	D	T	H	L	Y	S	N	H	M	D	Q	T	H	L	Q	L	S	R	E	P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	H	M	F	Y	Q	F	N	V	R	N	G	Y	L	D	L	Q	W	Y	Q	R	S	V	D	V	F	L	G	L	P	F	N	I	A	S	Y	A	T	L	V	H	I	V	A	K	M	C	N	L	I	P	G	D	L	I	F	S	G	G	N	T	H	I	Y	M	N	H	V	E	Q	C	K	E	I	L	R	R	E	P	K
Template Known Secondary structure		S										S	S													T	T	T	T																				T																	S	S			T	T	T	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		226	.	.	.	230	.	.													.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	P	K	L	I	I	.	.	.	.	.	.	.	.	.	.	.	.	K	R	K	P	E	S	I	F	D	Y	R	F	E	D	F	E	I	E	G	Y	D	P	H	P	G	I	K	A	P	V	A	I
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	C	E	L	V	I	S	G	L	P	Y	K	F	R	Y	L	S	T	K	E	Q	L	K	Y	V	L	K	L	R	P	K	D	F	V	L	N	N	Y	V	S	H	P	P	I	K	G	K	M	A	V
Template Known Secondary structure		S											G	G	G	G	G	S											T			G	G	G				S	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions