Job Description P0A884 Confidence 100.00% Date Thu Jan 5 11:07:10 GMT 2012 Rank 2 Aligned Residues 263 % Identity 51% Template d1qzfa2 SCOP info Thymidylate synthase/dCMP hydroxymethylase Thymidylate synthase/dCMP hydroxymethylase Thymidylate synthase/dCMP hydroxymethylase Resolution 2.80

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	Y	L	E	L	M	Q	K	V	L	D	E	G	T	Q	K	N	D	R	T	G	T	G	T	L	S	I	F	G	H	Q	M	R	F	N	L	Q	D	G	F	P	L	V	T	T	K	R	C	H	L	R	S	I	I	H	E	L	L	W	F	L	Q	G	D	T	N	I	A	Y	L	H	E	N	N	V	T	I	W	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Q	Y	L	D	L	L	S	R	V	L	E	N	G	A	Y	R	E	N	R	T	G	I	S	T	Y	S	I	F	G	Q	M	M	R	F	D	M	R	E	S	F	P	L	L	T	T	K	K	V	A	I	R	S	I	F	E	E	L	I	W	F	I	K	G	D	T	N	G	N	H	L	I	E	K	K	V	Y	I	W	S
Template Known Secondary structure																					S	S	S	S															S	S						S	S	S																	T			B							T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		82	.	.	.													.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.									.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		E	W	A	D	.	.	.	.	.	.	.	.	.	.	.	.	E	N	G	D	L	G	P	V	Y	G	K	Q	W	R	A	W	P	T	P	.	.	.	.	.	.	.	.	D	G	R	H	I	D	Q	I	T	T	V	L	N	Q	L	K	N	D	P	D	S	R	R	I	I	V	S	A	W	N	V	G	E	L	D	K	M
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	G	S	K	E	Y	L	E	R	I	G	L	G	H	R	E	E	N	D	L	G	P	I	Y	G	F	Q	W	R	H	Y	N	G	E	Y	K	T	M	H	D	D	Y	T	G	V	G	V	D	Q	L	A	K	L	I	E	T	L	K	N	N	P	K	D	R	R	H	I	L	T	A	W	N	P	S	A	L	S	Q	M
Template Known Secondary structure		G	G	G	S							T	T		T	T	S		T	T	B			S		T	T					S	B	T						T	T	S			T	T		S	B													S	T	T		S									T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		A	L	A	P	C	H	A	F	F	Q	F	Y	V	A	.	D	G	K	L	S	C	Q	L	Y	Q	R	S	C	D	V	F	L	G	L	P	F	N	I	A	S	Y	A	L	L	V	H	M	M	A	Q	Q	C	D	L	E	V	G	D	F	V	W	T	G	G	D	T	H	L	Y	S	N	H	M	D	Q	T	H	L	Q	L
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		A	L	P	P	C	H	V	L	S	Q	Y	Y	V	T	N	D	N	C	L	S	C	N	L	Y	Q	R	S	C	D	L	G	L	G	S	P	F	N	I	A	S	Y	A	I	L	T	M	M	L	A	Q	V	C	G	Y	E	P	G	E	L	A	I	F	I	G	D	A	H	I	Y	E	N	H	L	T	Q	L	K	E	Q	L
Template Known Secondary structure		S	S			S										T	T	S													T	T	T																					T																	G	G	G
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	E	P	R	P	L	P	K	L	I	I	K	R	K	P	E	S	I	F	D	Y	R	F	E	D	F	E	I	E	G	Y	D	P	H	P	G	I	K	A	P	V	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	T	P	R	P	F	P	Q	L	K	F	K	R	K	V	E	N	I	E	D	F	K	W	E	D	I	E	L	I	G	Y	Y	P	Y	P	T	I	K	M	D	M	A	V
Template Known Secondary structure		T	S											S	S			S	S	G	G	G			G	G	G					T
Template Predicted Secondary structure
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions