Job Description P0A884 Confidence 100.00% Date Thu Jan 5 11:07:10 GMT 2012 Rank 3 Aligned Residues 262 % Identity 48% Template d1j3kc_ SCOP info Thymidylate synthase/dCMP hydroxymethylase Thymidylate synthase/dCMP hydroxymethylase Thymidylate synthase/dCMP hydroxymethylase Resolution 2.10

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	Y	L	E	L	M	Q	K	V	L	D	E	G	T	Q	K	N	D	R	T	G	T	G	T	L	S	I	F	G	H	Q	M	R	F	N	L	Q	D	G	F	P	L	V	T	T	K	R	C	H	L	R	S	I	I	H	E	L	L	W	F	L	Q	G	D	T	N	I	A	Y	L	H	E	N	N	V	T	I	W	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q	Y	L	N	I	I	Y	D	I	M	M	N	G	N	K	Q	S	D	R	T	G	V	G	V	L	S	K	F	G	Y	I	M	K	F	D	L	S	Q	Y	F	P	L	L	T	T	K	K	L	F	L	R	G	I	I	E	E	L	L	W	F	I	R	G	E	T	N	G	N	T	L	L	N	K	N	V	R	I	W	E
Template Known Secondary structure																					T	T	S	S														T	T	T						S	S	S																T	T			B						T	T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		82	.	.	.													.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		E	W	A	D	.	.	.	.	.	.	.	.	.	.	.	.	E	N	G	D	L	G	P	V	Y	G	K	Q	W	R	A	W	P	.	.	.	.	.	.	.	.	T	P	D	G	R	H	I	D	Q	I	T	T	V	L	N	Q	L	K	N	D	P	D	S	R	R	I	I	V	S	A	W	N	V	G	E	L	D	K	M
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	N	G	T	R	E	F	L	D	N	R	K	L	F	H	R	E	V	N	D	L	G	P	I	Y	G	F	Q	W	R	H	F	G	A	E	Y	T	N	M	Y	D	N	Y	E	N	K	G	V	D	Q	L	K	N	I	I	N	L	I	K	N	D	P	T	S	R	R	I	L	L	C	A	W	N	V	K	D	L	D	Q	M
Template Known Secondary structure		G	G	G	S							T	T		T	T	S		T	T	B			S									B	T	S					T	T	S			T	T		S	B														T	T		S									G	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	P	C	H	A	F	F	Q	F	Y	V	A	D	G	K	L	S	C	Q	L	Y	Q	R	S	C	D	V	F	L	G	L	P	F	N	I	A	S	Y	A	L	L	V	H	M	M	A	Q	Q	C	D	L	E	V	G	D	F	V	W	T	G	G	D	T	H	L	Y	S	N	H	M	D	Q	T	H	L	Q	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	P	P	C	H	I	L	C	Q	F	Y	V	F	D	G	K	L	S	C	I	M	Y	Q	R	S	C	D	L	G	L	G	V	P	F	N	I	A	S	Y	S	I	F	T	H	M	I	A	Q	V	C	N	L	Q	P	A	Q	F	I	H	V	L	G	N	A	H	V	Y	N	N	H	I	D	S	L	K	I	Q	L	N
Template Known Secondary structure		S	S			S										T	T													T	T	T																				T	T																	G	G	G								T	T
Template Predicted Secondary structure
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	P	R	P	L	P	K	L	I	I	K	R	K	P	E	S	I	F	D	Y	R	F	E	D	F	E	I	E	G	Y	D	P	H	P	G	I	K	A	P	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	P	Y	P	F	P	T	L	K	L	N	P	D	I	K	N	I	E	D	F	T	I	S	D	F	T	I	Q	N	Y	V	H	H	E	K	I	S	M	D	M	A
Template Known Secondary structure		S												T	T			S	G	G	G			G	G	G																S
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions