Job Description P0A884 Confidence 100.00% Date Thu Jan 5 11:07:10 GMT 2012 Rank 13 Aligned Residues 263 % Identity 49% Template d1f28a_ SCOP info Thymidylate synthase/dCMP hydroxymethylase Thymidylate synthase/dCMP hydroxymethylase Thymidylate synthase/dCMP hydroxymethylase Resolution 1.90

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.									.
Query SS confidence																																.									.
Query Sequence		K	Q	Y	L	E	L	M	Q	K	V	L	D	E	G	T	Q	K	N	D	R	T	G	T	G	T	L	S	I	F	G	.	H	Q	M	R	F	N	L	Q	.	D	G	F	P	L	V	T	T	K	R	C	H	L	R	S	I	I	H	E	L	L	W	F	L	Q	G	D	T	N	I	A	Y	L	H	E	N	N	V	T	I
Query Conservation																																.									.
Alig confidence																																.									.
Template Conservation
Template Sequence		Q	Q	Y	L	N	L	V	Q	Y	I	I	N	H	G	E	D	R	P	D	R	T	G	T	G	T	L	S	V	F	A	P	S	P	L	K	F	S	L	R	N	K	T	F	P	L	L	T	T	K	R	V	F	I	R	G	V	I	E	E	L	L	W	F	I	R	G	E	T	D	S	L	K	L	R	E	K	N	I	H	I
Template Known Secondary structure																					T	T	S	S							S									G	G	G	B					S	S	S																T	T			B						T	T	T			T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		80	.	.	.	.													.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.									.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		W	D	E	W	A	.	.	.	.	.	.	.	.	.	.	.	.	D	E	N	G	D	L	G	P	V	Y	G	K	Q	W	R	A	W	P	T	.	.	.	.	.	.	.	.	P	D	G	R	H	I	D	Q	I	T	T	V	L	N	Q	L	K	N	D	P	D	S	R	R	I	I	V	S	A	W	N	V	G	E	L	D
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	D	A	N	G	S	R	E	Y	L	D	S	I	G	L	T	K	R	Q	E	G	D	L	G	P	I	Y	G	F	Q	W	R	H	F	G	A	E	Y	I	D	C	K	T	N	Y	I	G	Q	G	V	D	Q	L	A	N	I	I	Q	K	I	R	T	S	P	Y	D	R	R	L	I	L	S	A	W	N	P	A	D	L	E
Template Known Secondary structure		T					S							T	T		T	T	S		T	T	B			S									B	T						T	T	S			T	T		S	B														T	T		S									T	T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.							.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		K	M	A	L	A	P	C	H	A	F	F	Q	F	Y	V	.	.	.	.	.	.	A	D	G	K	L	S	C	Q	L	Y	Q	R	S	C	D	V	F	L	G	L	P	F	N	I	A	S	Y	A	L	L	V	H	M	M	A	Q	Q	C	D	L	E	V	G	D	F	V	W	T	G	G	D	T	H	L	Y	S	N	H	M
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.
Template Conservation
Template Sequence		K	M	A	L	P	P	C	H	M	F	C	Q	F	Y	V	H	I	P	S	N	N	H	R	P	E	L	S	C	Q	L	Y	Q	R	S	C	D	M	G	L	G	V	P	F	N	I	A	S	Y	A	L	L	T	C	M	I	A	H	V	C	D	L	D	P	G	D	F	I	H	V	M	G	D	C	H	I	Y	K	D	H	I
Template Known Secondary structure		G	S	S	S			S												S	T	T	S															T	T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	T	H	L	Q	L	S	R	E	P	R	P	L	P	K	L	I	I	K	R	K	P	E	S	I	F	D	Y	R	F	E	D	F	E	I	E	G	Y	D	P	H	P	G	I	K	A	P	V	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	L	Q	Q	Q	L	T	R	S	P	R	P	F	P	T	L	S	L	N	R	S	I	T	D	I	E	D	F	T	L	D	D	F	N	I	Q	N	Y	H	P	Y	E	T	I	K	M	K	M	S	I
Template Known Secondary structure						T	G	G	G	S												S				S	G	G	G			G	G	G					S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions