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Job DescriptionP0A884
Confidence100.00%DateThu Jan 5 11:07:10 GMT 2012
Rank15Aligned Residues262
% Identity37%Templated1bkpa_
SCOP infoThymidylate synthase/dCMP hydroxymethylase Thymidylate synthase/dCMP hydroxymethylase Thymidylate synthase/dCMP hydroxymethylase
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  KQYLELMQKVLDEGTQKN. . . . . . . . . . DRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTN. IA
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Template Sequence  KQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE. VPILTTKKVAWKTAIKELLWIWQLKSNDVN
Template Known Secondary structure 

TTS



BBTTT

B


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TS


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Query Sequence  YLHENNVTIWDEWADENGDLGPVYGKQWRAW. PTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAF
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Template Sequence  DLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYE
Template Known Secondary structure  TTT

TTGGG

TTSB
BS
T


TT
STT
S

S

TTTGGGBSS

S
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   150.........160.........170.........180.........190.........200.........210.........220.........
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Query Sequence  FQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPK
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Template Sequence  TQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE
Template Known Secondary structure  TTTTTTT
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   230.........240.........250.........260....
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Query Sequence  LIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI
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Template Sequence  LWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV
Template Known Secondary structure 
TT

SGGG

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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