Return to main results Retrieve Phyre Job Id

Job DescriptionP0A884
Confidence100.00%DateThu Jan 5 11:07:10 GMT 2012
Rank6Aligned Residues262
% Identity49%Templatec3k2hA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dihydrofolate reductase/thymidylate synthase; PDBTitle: co-crystal structure of dihydrofolate reductase/thymidylate synthase2 from babesia bovis with dump, pemetrexed and nadp
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWD
Query Conservation 



 

  

  
    



  
  


   
 

   







   
  
 



 
 
      
 
    

 
Alig confidence 















































































Template Conservation   


 
   

  
     


  
 
 

   
 

   






    
    




  
 

   
 
    


Template Sequence  FQYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWFIKGSTNGNDLLAKNVRIWE
Template Known Secondary structure 


TTSS
TTT




TTTT

TT

BTTTT

TT
Template Predicted Secondary structure 





























Template SS confidence 















































































   229230.........240.........250.........260.........270.........280.........290.........300........
 
   82 .......90.........100. ........110.........120.........130.........140.
Predicted Secondary structure  ............













........




















Query SS confidence 
. . . . . . . . . . . .


















. . . . . . . .







































Query Sequence  E. . . . . . . . . . . . WADENGDLGPVYGKQWRAW. . . . . . . . PTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKM
Query Conservation   ............     
 

  

 
 
  ........        


  

  

  
 


 

  


 
    
Alig confidence 
............


















........







































Template Conservation   
                



  

 


                




  

  

 

 


 
   


 

   
Template Sequence  LNGRRDFLDKNGFTDREEHDLGPIYGFQWRHFGAEYLDMHADYTGKGIDQLAEIINRIKTNPNDRRLIVCSWNVSDLKKM
Template Known Secondary structure  STT
TTS
TTB

S
BTS



TTS

TT
SB

TT
S




TTTGGG
Template Predicted Secondary structure 

















































Template SS confidence 















































































   309310.........320.........330.........340.........350.........360.........370.........380........
 
   142.......150.........160.........170.........180.........190.........200.........210.........220.
Predicted Secondary structure 











Query SS confidence 















































































Query Sequence  ALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLS
Query Conservation   
 

    

 
  
 
     


 
  

 
 

     
   

   

  
   
     


  
 
 
 
 
 
Alig confidence 















































































Template Conservation   
 

    

 
  
 
     


 
  

 



  

 
   

   

  
   
  

 


 

 
 
 


 
Template Sequence  ALPPCHCFFQFYVSDNKLSCMMHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIA
Template Known Secondary structure  SS

STTTTTTT
GGGT
Template Predicted Secondary structure 
















Template SS confidence 















































































   389390.........400.........410.........420.........430.........440.........450.........460........
 
   222.......230.........240.........250.........260...
Predicted Secondary structure 
























Query SS confidence 









































Query Sequence  REPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVA
Query Conservation 
 
   
 
               
  
  
     
    
Alig confidence 









































Template Conservation 
 
   
 
 
        
    
  
  
     
   

Template Sequence  RIPHPFPRLRLNPDIRNIEDFTIDDIVVEDYVSHPPIPMAMS
Template Known Secondary structure  S






TT

SGGG

GGGS











Template Predicted Secondary structure 































Template SS confidence 









































   469470.........480.........490.........500.........510
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions