Job Description P0A884 Confidence 100.00% Date Thu Jan 5 11:07:10 GMT 2012 Rank 9 Aligned Residues 258 % Identity 51% Template c3clbA_ PDB info PDB header:oxidoreductase, transferase Chain: A: PDB Molecule:dhfr-ts; PDBTitle: structure of bifunctional tcdhfr-ts in complex with tmq Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		K	Q	Y	L	E	L	M	Q	K	V	L	D	E	G	T	Q	K	N	D	R	T	G	T	G	T	L	S	I	F	G	H	Q	M	R	F	N	L	Q	D	G	.	F	P	L	V	T	T	K	R	C	H	L	R	S	I	I	H	E	L	L	W	F	L	Q	G	D	T	N	I	A	Y	L	H	E	N	N	V	T	I	W
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		E	Q	Y	L	S	L	V	D	R	I	I	R	E	G	N	V	K	H	D	R	T	G	V	G	T	L	S	I	F	G	A	Q	M	R	F	S	L	R	N	N	R	L	P	L	L	T	T	K	R	V	F	W	R	G	V	C	E	E	L	L	W	F	L	R	G	E	T	Y	A	K	K	L	S	D	K	G	V	H	I	W
Template Known Secondary structure																					T	T																	G	G	G	B					S	S	S																T	T			B	T					T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		81	.													.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.									.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		D	E	.	.	.	.	.	.	.	.	.	.	.	.	W	A	D	E	N	G	D	L	G	P	V	Y	G	K	Q	W	R	A	W	.	.	.	.	.	.	.	.	P	T	P	D	G	R	H	I	D	Q	I	T	T	V	L	N	Q	L	K	N	D	P	D	S	R	R	I	I	V	S	A	W	N	V	G	E	L	D	K
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	N	G	S	R	A	F	L	D	S	R	G	L	T	E	Y	E	E	M	D	L	G	P	V	Y	G	F	Q	W	R	H	F	G	A	A	Y	T	H	H	D	A	N	Y	D	G	Q	G	V	D	Q	I	K	A	I	V	E	T	L	K	T	N	P	D	D	R	R	M	L	F	T	A	W	N	P	S	A	L	P	R
Template Known Secondary structure		S	G	G	G	S							T	T			S	S		T	T	B			S									B	T						T	T	S			T	T		S	B														T	T		S									T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	L	A	P	C	H	A	F	F	Q	F	Y	V	A	D	G	K	L	S	C	Q	L	Y	Q	R	S	C	D	V	F	L	G	L	P	F	N	I	A	S	Y	A	L	L	V	H	M	M	A	Q	Q	C	D	L	E	V	G	D	F	V	W	T	G	G	D	T	H	L	Y	S	N	H	M	D	Q	T	H	L	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	A	L	P	P	C	H	L	L	A	Q	F	Y	V	S	N	G	E	L	S	C	M	L	Y	Q	R	S	C	D	M	G	L	G	V	P	F	N	I	A	S	Y	A	L	L	T	I	L	I	A	K	A	T	G	L	R	P	G	E	L	V	H	T	L	G	D	A	H	V	Y	S	N	H	V	E	P	C	N	E	Q	L
Template Known Secondary structure		S	S	S			S										T	T													T	T	T																					T																	G	G	G
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	E	P	R	P	L	P	K	L	I	I	K	R	K	P	E	S	I	F	D	Y	R	F	E	D	F	E	I	E	G	Y	D	P	H	P	G	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	V	P	R	A	F	P	Y	L	V	F	R	R	E	R	E	F	L	E	D	Y	E	E	G	D	M	E	V	I	D	Y	A	P	Y	P	P	I	S
Template Known Secondary structure		T	S											S	S			S	B	G	G	G			G	G	G					S
Template Predicted Secondary structure
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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