Return to main results Retrieve Phyre Job Id

Job DescriptionP31434
Confidence96.66%DateThu Jan 5 11:47:24 GMT 2012
Rank106Aligned Residues116
% Identity15%Templated3dhpa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   308.310.........320...... ...330.........340........ .350.........360......
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Query Sequence  FWMKAFQWCDFEWDPLTFP. . . DPEGMIRRLKAKGLKICVWINP. YIGQKSPVFKELQEKGYL. . . . . . . . . . . . . . . . .
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Template Sequence  PWWERYQPVSYKLC. TRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGAD
Template Known Secondary structure 
GGGGGSBS
S
S
.BTTB
TT


STTS
SBS
BTT


BBGGGTBBTTTTB
GGG
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   57..60.........70 .........80.........90.........100.........110.........120.........130.....
 
   367..370.........380.........390.........400.........410.........420....
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Query Sequence  . . . . . . . . . . . . LKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTD
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Template Sequence  FNDGKCKTGSGDIENYNDATQVRDCRLSGLLDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMAPG
Template Known Secondary structure  B
TTT

SSSSB


TT
SBGGGB
TTST

TTGGGS
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   136...140.........150.........160.........170.........180.........190.........200.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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