Job Description P31434 Confidence 97.07% Date Thu Jan 5 11:47:24 GMT 2012 Rank 93 Aligned Residues 139 % Identity 14% Template d2guya2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.59

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		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.													.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																					.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																					.	.
Query Sequence		A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	P	L	H	V	F	H	F	D	C	F	W	M	K	.	.	.	.	.	.	.	.	.	.	.	.	A	F	Q	W	C	D	F	E	W	D	P	L	T	F	P	.	.	.	D	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I	C	V	W	I	.	.
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																					.	.
Alig confidence																	.	.												.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																					.	.
Template Conservation																	.	.
Template Sequence		Q	G	I	I	D	K	L	D	Y	I	Q	G	M	G	F	.	.	T	A	I	W	I	T	P	V	T	A	Q	L	P	Q	T	T	A	Y	G	D	A	Y	H	G	Y	W	Q	Q	D	I	Y	S	L	N	E	N	Y	G	T	A	D	D	L	K	A	L	S	S	A	L	H	E	R	G	M	Y	L	M	V	D	V	V	A
Template Known Secondary structure							T						T	T	T		.	.																B	T	T	B			T	T	S		S									T	T	S																T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
								347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.										.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410
Predicted Secondary structure		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.																							.
Query SS confidence		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.																							.
Query Sequence		.	.	.	.	.	.	N	P	Y	I	G	Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	.	.	.	.	.	.	.	.	.	A	I	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	.	A	M	G	V
Query Conservation		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.																							.
Alig confidence		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		N	H	M	G	Y	D	G	A	G	S	S	V	D	Y	S	V	F	K	P	F	S	S	Q	D	Y	F	H	P	F	C	F	I	Q	N	Y	E	D	Q	T	Q	V	E	D	C	W	L	G	D	N	T	V	S	L	P	D	L	D	T	T	K	D	V	V	K	N	E	W	Y	D	W	V	G	S	L	V	S	N	Y	S	I
Template Known Secondary structure		S	B					B		G	G	G			G	G	G	S	B	S			S	G	G	G	B			S		B				T	T								S	B				S	S					B	B		T	T	S																			T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		411	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	C	F	K	T	D	F	G	E	R	I	P	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	L	R	I	D	T	V	K	H	V	Q	K	D
Template Known Secondary structure							T	T	G	G	G	S		G	G
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions