Return to main results Retrieve Phyre Job Id

Job DescriptionP31434
Confidence99.88%DateThu Jan 5 11:47:24 GMT 2012
Rank15Aligned Residues196
% Identity18%Templated1zy9a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases YicI catalytic domain-like
Resolution2.34

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   278.280.........290.........300.........310.........320.........330.........340.........350 ......
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Query Sequence  TTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYI. GQKSPV
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Template Sequence  FLDLTWEETLKNLKLAKN. . FPFEVFQIDDAYEKDIG. . DWLVTRGDFPSVEEXAKVIAENGFIPGIWTAPFSVSETSDV
Template Known Secondary structure  GGG

GGG..TT
S
TTSTT..
TT


TT

TTTT
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   194.....200.........210. ........220........ .230.........240.........250.........260.........
 
   357..360.........370.........380.........390.........400.........410.........420.........430......
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Query Sequence  FKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKM
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Template Sequence  FNE. . HPDWVVKENGEPKXAYRNWNKKIYALDLSKDEVLNWLFDLFSSLRKXGYRYFKIDFLFAGAVPGERKKNIT. . . .
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GGGB
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TTB
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GGGGG
SSB
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   270.. .......280.........290.........300.........310.........320.........330.........340...
 
   437..440.........450.........460.........470...... ...480.......
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Query Sequence  HNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFP. . VHWGGDCYANY
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Template Sequence  . . . . PIQAFRKGIETIRKAVGEDSFILGCGSPLLPAVGCVDGXRIGPDTAPFW
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TTS
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SGGGTTT
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   344.....350.........360.........370.........380.........390..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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