Job Description P31434 Confidence 95.82% Date Thu Jan 5 11:47:24 GMT 2012 Rank 119 Aligned Residues 98 % Identity 15% Template d1ud2a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.13

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		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.																																												.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I	C	V	W	I	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	G	Q	K	S	P	V	F	K	E	L	Q	E	K
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	E	R	A	I	G	S	L	K	S	N	D	I	N	V	Y	G	D	V	V	M	N	H	K	M	G	A	D	F	T	E	A	V	Q	A	V	Q	V	N	P	T	N	R	W	Q	D	I	S	G	A	Y	T	I	D	A	W	T	G	F	D	F	S	G	R	N	N	A	Y	S	D	F	K	W	R	W	F	H	F	N
Template Known Secondary structure													T	T										S						S												T	T							S											B			G	G	G	T	T	S	S					B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.																	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	I	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	.	A	M	G	V	D	C	F	K	T	D	F	G	E	R	I	P	T	D
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		G	V	D	W	D	Q	R	Y	Q	E	N	H	I	F	R	F	A	N	T	N	W	N	W	R	V	D	E	E	N	G	N	Y	D	Y	L	L	G	S	N	I	D	F	S	H	P	E	V	Q	D	E	L	K	D	W	G	S	W	F	T	D	E	L	D	L	D	G	Y	R	L	D	A	I	K	H	I	P	F	W
Template Known Secondary structure							T	T	T	T								T	T					S	S				T	T	S						S	S					T	T	S																			T		S					T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions