Job Description P31434 Confidence 97.84% Date Thu Jan 5 11:47:24 GMT 2012 Rank 39 Aligned Residues 139 % Identity 12% Template d1ua7a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.21

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.																.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																			.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																			.
Query Sequence		A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	P	L	H	V	F	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	C	F	W	M	K	A	F	Q	W	C	D	F	E	W	D	P	L	T	F	P	.	.	.	D	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I	C	V	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																			.
Alig confidence																	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																			.
Template Conservation																	.	.
Template Sequence		N	T	L	K	H	N	M	K	D	I	H	D	A	G	Y	.	.	T	A	I	Q	T	S	P	I	N	Q	V	K	E	G	N	Q	G	D	K	S	M	S	N	W	Y	W	L	Y	Q	P	T	S	Y	Q	I	G	N	R	Y	L	G	T	E	Q	E	F	K	E	M	C	A	A	A	E	E	Y	G	I	K	V	I	V	D
Template Known Secondary structure							T							T	T		.	.	S													T	G	G	G			B	G	G	G	G	G	G	G	G										T	T	T															T	T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.								.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.
Query Sequence		W	I	N	P	Y	I	G	Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	S	.	.	.	.	.	.	.	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	A	M	G	V	D	C	F	K	T	D	F
Query Conservation																															.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	I	N	H	T	T	F	D	Y	A	A	I	S	N	E	V	K	S	I	P	N	W	T	H	G	N	T	Q	I	K	N	W	S	D	R	W	D	V	T	Q	N	S	L	L	G	L	Y	D	W	N	T	Q	N	T	Q	V	Q	S	Y	L	K	R	F	L	E	R	A	L	N	D	G	A	D	G	F	R	F	D	A
Template Known Secondary structure					S	B			S		T	T	T	S						T	S	T	T							B				T	T								S	B	B	T	T	B					T	T	S																	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		418	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	R	I	P	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	H	I	E	L	P
Template Known Secondary structure		G	G	G	S			T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions