Job Description P31434 Confidence 99.46% Date Thu Jan 5 11:47:24 GMT 2012 Rank 21 Aligned Residues 227 % Identity 16% Template d1szna2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.54

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		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.
Predicted Secondary structure																																									.	.	.																		.	.														.
Query SS confidence																																									.	.	.																		.	.														.
Query Sequence		G	R	P	A	L	P	P	A	W	S	F	G	L	W	L	T	T	S	F	T	T	N	Y	D	E	A	T	V	N	S	F	I	D	G	M	A	E	R	N	.	.	.	L	P	L	H	V	F	H	F	D	C	F	W	M	K	A	F	Q	.	.	W	C	D	F	E	W	D	P	L	T	F	P	D	.	P	E	G	M	I
Query Conservation																																									.	.	.																		.	.														.
Alig confidence									.	.	.																														.	.	.																		.	.														.
Template Conservation									.	.	.
Template Sequence		V	T	G	K	V	P	S	.	.	.	L	G	W	N	S	W	N	A	Y	H	C	D	I	D	E	S	K	F	L	S	A	A	E	L	I	V	S	S	G	L	L	D	A	G	Y	N	Y	V	N	I	D	D	C	W	S	M	K	D	G	R	V	D	G	H	I	A	P	N	A	T	R	F	P	D	G	I	D	G	L	A
Template Known Secondary structure		S	T	T	T	S			.	.	.					S					T	T																	T	T					T								S	S		B		T	T			B	T	T	B			B		T	T	T		T	T
Template Predicted Secondary structure									.	.	.
Template SS confidence
		7	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350									.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.
Query Sequence		R	R	L	K	A	K	G	L	K	I	C	V	W	I	N	P	Y	I	.	.	.	.	.	.	.	.	G	Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G
Query Conservation																				.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	V	H	A	L	G	L	K	L	G	I	Y	S	T	A	G	T	A	T	C	A	G	Y	P	A	S	L	G	Y	E	D	V	D	A	A	D	F	A	D	W	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	L	K	Y	D	N	C	N	V	P	S	D	W	Q	D	E
Template Known Secondary structure							T	T									S	S	S	B		T	T	S		B			T	T												T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												G	G	G	S		S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.							.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.
Query Sequence		L	V	A	M	G	V	D	C	F	K	T	D	F	G	E	R	I	P	T	D	V	Q	W	F	D	G	S	D	P	Q	K	M	H	N	H	Y	A	Y	I	Y	N	E	L	V	W	N	V	L	K	D	T	V	G	E	E	E	A	V	L	F	A	R	S	A	S	V	G	A	Q	.	.	.	.	.	.	K	F	P	V	H
Query Conservation																																																																							.	.	.	.	.	.
Alig confidence																																																						.	.	.															.	.	.	.	.	.
Template Conservation																																																						.	.	.
Template Sequence		Y	V	A	C	N	P	D	F	V	K	T	G	P	N	G	T	C	T	T	A	L	D	P	T	L	A	P	P	G	Y	D	W	S	T	S	K	S	A	E	R	F	G	A	M	R	N	A	L	A	K	Q	S	.	.	.	H	E	I	V	L	S	M	C	I	W	G	Q	A	D	V	F	S	W	G	N	S	T	G	I	S
Template Known Secondary structure		S	B				T	T	T	S			B	G	G	G	B			T	T	T		T	T	B			T	T			G	G	G	S															T	S	S	.	.	.	S									T	T	G	G	G					G	G	G	T		S
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		479			480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		W	.	.	G	G	D	C	Y	A	N	Y	E	S	M	A	E	S	L	R	G	G	L	S	I	G	L	S	G	F	G	F	W	S	H	D
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		W	R	M	S	D	D	I	S	P	N	W	G	S	V	T	R	I	L	N	L	N	S	F	K	L	N	S	V	D	F	W	G	H	N	D
Template Known Secondary structure					S	S				S	S													T		G	G	G		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions