Job Description P31434 Confidence 99.31% Date Thu Jan 5 11:47:24 GMT 2012 Rank 22 Aligned Residues 182 % Identity 18% Template d1r46a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 3.25

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		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280													.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.																	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.																	.	.
Query Sequence		G	R	P	A	L	P	P	A	W	S	F	G	L	W	L	T	T	S	F	T	T	N	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	E	A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	.	.	.	P	L	H	V	F	H	F	D	C	F	W	M	K	A	F	Q	.	.	W	C	D	F	E	W	D
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.																	.	.
Alig confidence									.	.	.			.	.									.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.																	.	.
Template Conservation									.	.	.			.	.
Template Sequence		G	L	A	R	T	P	T	.	.	.	M	G	.	.	W	L	H	W	E	R	F	M	C	N	L	D	C	Q	E	E	P	D	S	C	I	S	E	K	L	F	M	E	M	A	E	L	M	V	S	E	G	W	K	D	A	G	Y	E	Y	L	C	I	D	D	C	W	M	A	P	Q	R	D	S	E	G	R	L	Q	A	D
Template Known Secondary structure		S			S	S			.	.	.			.	.			S					T	T				T	T	T		T	T	T	S		S														T	T					T								S	S		B		S	S			T	T	S				B
Template Predicted Secondary structure									.	.	.			.	.
Template SS confidence
		35	.	.	.	.	40	.				.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		322	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		P	L	T	F	P	D	.	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I	C	V	W	I	N	P	Y	I	G	Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D
Query Conservation								.
Alig confidence								.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	R	F	P	H	G	I	R	Q	L	A	N	Y	V	H	S	K	G	L	K	L	G	I	Y	A	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	K	T	C	A	G	F	P	G	S	F	G	Y	Y	D	I
Template Known Secondary structure		T	T	T		T	T												T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B		T	T	S	S	B			T	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																																				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.												.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	K	G	L	V	A	M	G	V	D	C	F	K	T	D	F	G	E	R	I	P	T	D	V	Q	W	F	D	G	S	D	P	Q	K	M	H	N	H	Y	A	Y	I	Y	N	E	L	V	W	N	V	L	K	D	T	V	G	E	E	E	A	V	L	F	A	.	.	.	.	.	.	.	.	.	.	.	R	S	A	S
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		D	A	Q	T	F	A	D	W	G	V	D	L	L	K	F	D	G	C	Y	C	D	S	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	A	D	G	Y	K	H	M	S	L	A	L	N	R	T	G	.	.	.	R	S	I	V	Y	S	C	E	W	P	L	Y	M	W	P	F	Q	K	P	N	Y
Template Known Secondary structure										T										S		S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	S													T	T	T	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.																.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		470	.	.	.	.	.	.	.	.	.			480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		V	G	A	Q	K	F	P	V	H	W	.	.	G	G	D	C	Y	A	N	Y	E	S	M	A	E	S	L	R	G	G	L
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		T	E	I	R	Q	Y	C	N	H	W	R	N	F	A	D	I	D	D	S	W	K	S	I	K	S	I	L	D	W	T	S
Template Known Secondary structure					T	T	T		S					S					S	S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions