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Job DescriptionP31434
Confidence94.61%DateThu Jan 5 11:47:24 GMT 2012
Rank126Aligned Residues98
% Identity13%Templated1ob0a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.83

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   327..330.........340.........350....
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Query Sequence  DPEGMIRRLKAKGLKICVWINPYIGQKS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ELQSAIKSLHSRDINVYGDVVINHKGGADATEDVTAVEVDPADRNRVISGEVLIKAWTHFHFPGRGSTYSDFKWHWYHFD
Template Known Secondary structure  TT


S


STT
S

B

TTTTTSS



B
GGG
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   355....360.........370.........380...... ...390.........400........ .410.........420....
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Query Sequence  . . PVFKELQEKGYLLKRPDGSLWQWDKWQPGLAI. . . . . YDFTNPDACKWYADKLKGLVAM. GVDCFKTDFGERIPTD
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Template Sequence  GTDWDESRKLNRIYKFQGKAWDWEVSNEFGNYDYLMYADIDYDHPDVVAEIKRWGTWYANELQLDGFRLDAVKHIKFS
Template Known Secondary structure  S
BTTTTB


TT



SSS

TTS




SS
TT
T



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   162.......170.........180.........190.........200.........210.........220.........230.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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