Job Description P31434 Confidence 92.73% Date Thu Jan 5 11:47:24 GMT 2012 Rank 131 Aligned Residues 217 % Identity 8% Template d1ji1a3 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.60

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		285	.	.	.	.	290	.	.	.	.	.	.		.		.	.	300	.	.	.	.	.	.	.	.	.	310					.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.					.	340	.	.	.	.	.	.	.	.		.	350
Predicted Secondary structure														.		.														.	.	.	.																	.	.	.													.	.	.	.											.
Query SS confidence														.		.														.	.	.	.																	.	.	.													.	.	.	.											.
Query Sequence		T	V	N	S	F	I	D	G	M	A	E	R	.	N	.	L	P	L	H	V	F	H	F	D	C	F	W	M	.	.	.	.	K	A	F	Q	W	C	D	F	E	W	D	P	L	T	F	P	.	.	.	D	P	E	G	M	I	R	R	L	K	A	K	.	.	.	.	G	L	K	I	C	V	W	I	N	P	.	Y	I
Query Conservation														.		.														.	.	.	.																	.	.	.													.	.	.	.											.
Alig confidence														.		.														.	.	.	.																	.	.	.													.	.	.	.											.
Template Conservation
Template Sequence		D	L	A	G	I	D	Q	K	L	G	Y	I	K	K	T	L	G	A	N	I	L	Y	L	N	P	I	F	K	A	P	T	N	H	K	Y	D	T	Q	D	Y	M	A	V	D	P	A	F	G	D	N	S	T	L	Q	T	L	I	N	D	I	H	S	T	A	N	G	P	K	G	Y	L	I	L	D	G	V	F	N	H	T
Template Known Secondary structure									T						T	T	T								S						S	S	S	S			S		S							T	T	T																S	S	S	S	S											S	B
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.															.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.			.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.							.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																	.	.	.	.	.	.
Query Sequence		G	Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F	T	N	.	.	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	A	.	.	.	.	.	.	M
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	S	H	P	W	F	D	K	Y	N	N	F	S	S	Q	G	A	Y	E	S	Q	S	S	P	W	Y	N	Y	Y	T	F	Y	T	W	P	D	S	Y	A	S	F	L	G	F	N	S	L	P	K	L	N	Y	G	N	S	G	S	A	V	R	G	V	I	Y	N	N	S	N	S	V	A	K	T	Y	L	N	P	P	Y
Template Known Secondary structure			T	T	S	T	T	T		T	T			S	S	S			T	T	T		T	T		T	T	G	G	G	B					T	T	T						T	T						B	B	B			S	T	T								T	T	S	T	T	S							S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	D	C	F	K	T	D	F	G	E	R	I	P	T	D	V	Q	W	F	D	G	S	D	P	Q	K	M	H	N	H	Y	A	Y	I	Y	N	E	L	V	W	N	V	L	K	D	T	V	G	E	E	E	A	V	L	F	A	R	S	A	S	V	G	A	Q	K	F	P	V	H	W	G	G	D	C	Y	A	N	Y	E
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.																				.	.
Template Conservation																									.	.	.	.	.	.	.	.																				.	.
Template Sequence		S	V	D	G	W	R	L	D	A	A	Q	Y	V	D	A	N	G	N	N	G	S	D	V	.	.	.	.	.	.	.	.	T	N	H	Q	I	W	S	E	F	R	N	A	V	K	G	V	N	S	N	.	.	A	A	I	I	G	E	Y	W	G	N	A	N	P	W	T	A	Q	G	N	Q	W	D	A	A	T	N	F	D
Template Known Secondary structure									T	T	G	G	G		B	S	T	T				S	S		.	.	.	.	.	.	.	.																		T	T	.	.								S	S			G	G	G	T	T	T	S	S	S		S			B		T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.									.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	A	E	S	L	R	G	G	L	S	I	G	L	S	G	F	G	F	W	S	H	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	T	Q	P	V	S	E	W	I	T	G	K	D	Y	Q	N	N	S	A	S	I	S
Template Known Secondary structure		T	T									T	S	B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions