Job Description P31434 Confidence 97.44% Date Thu Jan 5 11:47:24 GMT 2012 Rank 69 Aligned Residues 136 % Identity 13% Template d1ht6a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.									.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.																						.	.	.																							.
Query SS confidence																								.	.	.	.	.	.	.	.																						.	.	.																							.
Query Sequence		A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	P	L	H	V	F	H	F	.	.	.	.	.	.	.	.	D	C	F	W	M	K	A	F	Q	W	C	D	F	E	W	D	P	L	T	F	P	.	.	.	D	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I	C	V	W	I	N	P	.	Y	I	G
Query Conservation																								.	.	.	.	.	.	.	.																						.	.	.																							.
Alig confidence																	.	.						.	.	.	.	.	.	.	.										.	.	.										.	.	.																							.
Template Conservation																	.	.																							.	.	.
Template Sequence		N	M	M	M	G	K	V	D	D	I	A	A	A	G	V	.	.	T	H	V	W	L	P	P	P	S	H	S	V	S	N	E	G	Y	M	P	G	R	L	.	.	.	Y	D	I	D	A	S	K	Y	G	N	A	A	E	L	K	S	L	I	G	A	L	H	G	K	G	V	Q	A	I	A	D	I	V	I	N	H	R	C
Template Known Secondary structure						T	T							T	T		.	.									S		B	S	S	T	T	S	S	S	B			T	.	.	.	T		G	G	G		T	T																T	T										S	B
Template Predicted Secondary structure																	.	.																							.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.																				.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	.	A	M	G	V	D
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		A	D	Y	K	D	S	R	G	I	Y	C	I	F	E	G	G	T	S	D	G	R	L	D	W	G	P	H	M	I	C	R	D	D	T	K	Y	S	D	G	T	A	N	L	D	T	G	A	D	F	A	A	A	P	D	I	D	H	L	N	D	R	V	Q	R	E	L	K	E	W	L	L	W	L	K	S	D	L	G	F	D
Template Known Secondary structure			S				T	T	S								S	S	S	S	S	T	T				G	G	G	B		T	T		T	T	T			S		S				S	S				T	T	S		B	B		T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F	K	T	D	F	G	E	R	I	P	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	W	R	L	D	F	A	R	G	Y	S	P	E
Template Known Secondary structure						T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions